RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 TDP1Q9NUW8 608 aa12.8□□□□□ -0.36
LINC00963-212ENST00000608669 GTSE1Q9NYZ3 720 aa12.8□□□□□ -0.36
LINC00963-212ENST00000608669 COX16Q9P0S2 106 aa12.8□□□□□ -0.36
LINC00963-212ENST00000608669 DUSP12Q9UNI6 340 aa12.8□□□□□ -0.36
LINC00963-212ENST00000608669 MIA3Q5JRA6 1907 aa12.8□□□□□ -0.36
LINC00963-212ENST00000608669 OTOL1A6NHN0 477 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-212ENST00000608669 CBFA2T2O43439 604 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 ECI2O75521 394 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 OLFM2O95897 454 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 LTFP02788 710 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 FYNP06241 537 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 FERP16591 822 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 TFE3P19532 575 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-212ENST00000608669 ZNF75DP51815 510 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 BPIFB4P59827 614 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 ZXDAP98168 799 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 SYPL2Q5VXT5 272 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 ZNF571Q7Z3V5 609 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-212ENST00000608669 YAF2Q8IY57 180 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 TMEM35BQ8NCS4 154 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 BHMTQ93088 406 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 AGPAT1Q99943 283 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 LINC00597Q9H2U6 94 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 IGSF9Q9P2J2 1179 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 FBXL21Q9UKT6 434 aa12.79□□□□□ -0.36
LINC00963-212ENST00000608669 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-212ENST00000608669 SLC12A8A0AV02 714 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 KRBA1A5PL33 1030 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 TRDMT1O14717 391 aaKnown RBP12.78□□□□□ -0.36
LINC00963-212ENST00000608669 NCAM1P13591 858 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 PSMC3P17980 439 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 DDX6P26196 483 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00963-212ENST00000608669 KLHL30Q0D2K2 578 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 CLEC16AQ2KHT3 1053 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 RAB6CQ53S08 254 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 SPECC1LQ69YQ0 1117 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 PM20D1Q6GTS8 502 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 TRNP1Q6NT89 227 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 OLFML1Q6UWY5 402 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 TAC4Q86UU9 113 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 XYLT1Q86Y38 959 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 BBS7Q8IWZ6 715 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 SIX5Q8N196 739 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 CELF5Q8N6W0 485 aaKnown RBP12.78□□□□□ -0.36
LINC00963-212ENST00000608669 EMC1Q8N766 993 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 IPO4Q8TEX9 1081 aaKnown RBP12.78□□□□□ -0.36
LINC00963-212ENST00000608669 OVCA2Q8WZ82 227 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 HSFY1Q96LI6 401 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 CEP295NLQ96MC4 621 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 SYT11Q9BT88 431 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 TRMT61BQ9BVS5 477 aaKnown RBP12.78□□□□□ -0.36
LINC00963-212ENST00000608669 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 RAB6CQ9H0N0 254 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 LHX5Q9H2C1 402 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 C11orf16Q9NQ32 467 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 CYLDQ9NQC7 956 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 HPS4Q9NQG7 708 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 METTL5Q9NRN9 209 aaKnown RBP12.78□□□□□ -0.36
LINC00963-212ENST00000608669 ARHGAP26Q9UNA1 814 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 CEP83Q9Y592 693 aa12.78□□□□□ -0.36
LINC00963-212ENST00000608669 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.36
LINC00963-212ENST00000608669 TECTAO75443 2155 aa12.77□□□□□ -0.36
LINC00963-212ENST00000608669 ANTXRLA6NF34 631 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00963-212ENST00000608669 ZNF263O14978 683 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-212ENST00000608669 TPM3P06753 285 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 RALAP11233 206 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 SRFP11831 508 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 ATP5C1P36542 298 aaKnown RBP12.77□□□□□ -0.37
LINC00963-212ENST00000608669 GGCXP38435 758 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 ATXN1P54253 815 aaKnown RBP12.77□□□□□ -0.37
LINC00963-212ENST00000608669 SLC7A9P82251 487 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-212ENST00000608669 SNX30Q5VWJ9 437 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 HGSNATQ68CP4 663 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 SARM1Q6SZW1 724 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 TPRG1Q6ZUI0 275 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 ERICH1Q86X53 443 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 MFSD6LQ8IWD5 586 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 DEFB106AQ8N104 65 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 SPC24Q8NBT2 197 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.37
LINC00963-212ENST00000608669 P2RY11Q96G91 374 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 KLF16Q9BXK1 252 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-212ENST00000608669 UBXN6Q9BZV1 441 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 FOXQ1Q9C009 403 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 TRPV4Q9HBA0 871 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 COMMD8Q9NX08 183 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 CALCOCO1Q9P1Z2 691 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 DNMT3LQ9UJW3 386 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 CAPN11Q9UMQ6 739 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 ITIH6Q6UXX5 1313 aa12.77□□□□□ -0.37
LINC00963-212ENST00000608669 ARNTLO00327 626 aa12.76□□□□□ -0.37
LINC00963-212ENST00000608669 MFAP3LO75121 409 aa12.76□□□□□ -0.37
LINC00963-212ENST00000608669 STC2O76061 302 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms