RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 HTR3DQ70Z44 454 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 APTXQ7Z2E3 356 aaKnown RBP14.99□□□□□ -0.01
HDDC2-206ENST00000608461 ADGRG2Q8IZP9 1017 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 RIN3Q8TB24 985 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 TRIM62Q9BVG3 475 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 LSM14BQ9BX40 385 aaKnown RBP14.99□□□□□ -0.01
HDDC2-206ENST00000608461 KLF16Q9BXK1 252 aaPredicted RBP14.99□□□□□ -0.01
HDDC2-206ENST00000608461 ULBP1Q9BZM6 244 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 EBF3Q9H4W6 596 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 ECT2Q9H8V3 914 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 HPS4Q9NQG7 708 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 ABCC13Q9NSE7 274 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 OSER1Q9NX31 292 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 CFAP97Q9P2B7 532 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 SH3BP1Q9Y3L3 701 aa14.99□□□□□ -0.01
HDDC2-206ENST00000608461 ZDBF2Q9HCK1 2354 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 SHISA7A6NL88 538 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 GALR2O43603 387 aaPredicted RBP14.98□□□□□ -0.01
HDDC2-206ENST00000608461 PI15O43692 258 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 CLCN1P35523 988 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 KRT9P35527 623 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 PGFP49763 221 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 DAOAP59103 153 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 TNK2Q07912 1038 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 RAPGEF1Q13905 1077 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 UBXN2BQ14CS0 331 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 ZSCAN23Q3MJ62 389 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 FILIP1LQ4L180 1135 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 DGKKQ5KSL6 1271 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 C10orf120Q5SQS8 335 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 BTBD8Q5XKL5 378 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 BEND5Q7L4P6 421 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 TMEM110Q86TL2 294 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 FMNL3Q8IVF7 1028 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 CCDC105Q8IYK2 499 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 ZNF687Q8N1G0 1237 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 SYNPOQ8N3V7 929 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 GOLGA1Q92805 767 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 NOX5Q96PH1 765 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 SLC4A5Q9BY07 1137 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 GANQ9H2C0 597 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 SMPD4Q9NXE4 827 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 DLGAP2Q9P1A6 1054 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 LSM7Q9UK45 103 aaKnown RBP14.98□□□□□ -0.01
HDDC2-206ENST00000608461 STRIP2Q9ULQ0 834 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 ZNF510Q9Y2H8 683 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 SIK3Q9Y2K2 1263 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 CEP83Q9Y592 693 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 FHOD1Q9Y613 1164 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 MIA3Q5JRA6 1907 aa14.98□□□□□ -0.01
HDDC2-206ENST00000608461 F8VZ95 297 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 TRDMT1O14717 391 aaKnown RBP14.97□□□□□ -0.01
HDDC2-206ENST00000608461 LCP1P13796 627 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 LRRC32Q14392 662 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 SYCP1Q15431 976 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 BSPRYQ5W0U4 402 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 RSRC2Q7L4I2 434 aaKnown RBP14.97□□□□□ -0.01
HDDC2-206ENST00000608461 BHLHA9Q7RTU4 235 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 ZNF677Q86XU0 584 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 DTWD2Q8NBA8 298 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 CCDC26Q8TAB7 109 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 RNF139Q8WU17 664 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 FOXQ1Q9C009 403 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 DCLK3Q9C098 648 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 AJAP1Q9UKB5 411 aaPredicted RBP14.97□□□□□ -0.01
HDDC2-206ENST00000608461 WNT6Q9Y6F9 365 aa14.97□□□□□ -0.01
HDDC2-206ENST00000608461 YJEFN3A6XGL0 299 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 E7ENQ6 273 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 TBX18O95935 607 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 ADH1CP00326 375 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 ATP1A3P13637 1013 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 ARSAP15289 507 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 CYP11B1P15538 503 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 CD72P21854 359 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 TARSP26639 723 aaKnown RBP14.96□□□□□ -0.01
HDDC2-206ENST00000608461 GJA4P35212 333 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 EIF2DP41214 584 aaKnown RBP14.96□□□□□ -0.01
HDDC2-206ENST00000608461 RGS7P49802 495 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 PTPN5P54829 565 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 FZD5Q13467 585 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 DENND1BQ6P3S1 775 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 SLC47A2Q86VL8 602 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 PCMTD1Q96MG8 357 aaPredicted RBP14.96□□□□□ -0.01
HDDC2-206ENST00000608461 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 LINC00597Q9H2U6 94 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 ACP6Q9NPH0 428 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
HDDC2-206ENST00000608461 ST7Q9NRC1 585 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 FAM207AQ9NSI2 230 aaPredicted RBP14.96□□□□□ -0.01
HDDC2-206ENST00000608461 MARCH2Q9P0N8 246 aa14.96□□□□□ -0.01
HDDC2-206ENST00000608461 F5P12259 2224 aa14.95□□□□□ -0.02
HDDC2-206ENST00000608461 OTOL1A6NHN0 477 aaPredicted RBP14.95□□□□□ -0.02
HDDC2-206ENST00000608461 GABBR2O75899 941 aa14.95□□□□□ -0.02
HDDC2-206ENST00000608461 CALCAP01258 141 aa14.95□□□□□ -0.02
HDDC2-206ENST00000608461 LTFP02788 710 aa14.95□□□□□ -0.02
HDDC2-206ENST00000608461 GLI1P08151 1106 aa14.95□□□□□ -0.02
HDDC2-206ENST00000608461 CCDC172P0C7W6 258 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms