RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SYNPOQ8N3V7 929 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 CRACR2AQ9BSW2 395 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 FAM124BQ9H5Z6 455 aaPredicted RBP12.93□□□□□ -0.34
CTSA-210ENST00000606000 ZDHHC4Q9NPG8 344 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 RASAL2Q9UJF2 1139 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 AJAP1Q9UKB5 411 aaPredicted RBP12.93□□□□□ -0.34
CTSA-210ENST00000606000 ATG2BQ96BY7 2078 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 F5P12259 2224 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 K7EQS6 105 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 SLC9A3R1O14745 358 aaPredicted RBP12.92□□□□□ -0.34
CTSA-210ENST00000606000 XPO1O14980 1071 aaKnown RBP12.92□□□□□ -0.34
CTSA-210ENST00000606000 TRIM24O15164 1050 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
CTSA-210ENST00000606000 HMBSP08397 361 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 SLC9A1P19634 815 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 RGS7P49802 495 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 ZNF132P52740 706 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 YWHAGP61981 247 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTSA-210ENST00000606000 BST2Q10589 180 aaKnown RBP12.92□□□□□ -0.34
CTSA-210ENST00000606000 EFEMP1Q12805 493 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 PKDCCQ504Y2 493 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 TMEM25Q86YD3 366 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 NAT16Q8N8M0 369 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 MLKLQ8NB16 471 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 GPT2Q8TD30 523 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 SECISBP2LQ93073 1101 aaKnown RBP12.92□□□□□ -0.34
CTSA-210ENST00000606000 HHIPQ96QV1 700 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 EPC1Q9H2F5 836 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 TBC1D14Q9P2M4 693 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 HESX1Q9UBX0 185 aa12.92□□□□□ -0.34
CTSA-210ENST00000606000 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTSA-210ENST00000606000 SMG5Q9UPR3 1016 aaKnown RBP12.92□□□□□ -0.34
CTSA-210ENST00000606000 M0QYV0 167 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 HRO43593 1189 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 STC2O76061 302 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 ADH1CP00326 375 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 KLKB1P03952 638 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 PAEPP09466 180 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 CHRM1P11229 460 aaPredicted RBP12.91□□□□□ -0.34
CTSA-210ENST00000606000 LCP1P13796 627 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 GCNT1Q02742 428 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 CETN1Q12798 172 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 PPP2R5DQ14738 602 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 ANO4Q32M45 955 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 C2orf27AQ580R0 203 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 TRIM65Q6PJ69 517 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 LCLAT1Q6UWP7 414 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 TPGS1Q6ZTW0 290 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 HTR3DQ70Z44 454 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 ETFBKMTQ8IXQ9 262 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 KIAA1958Q8N8K9 716 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 CLEC4CQ8WTT0 213 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 FAM126AQ9BYI3 521 aaPredicted RBP12.91□□□□□ -0.34
CTSA-210ENST00000606000 UBXN6Q9BZV1 441 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 SEMA4AQ9H3S1 761 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 LRRC4Q9HBW1 653 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 UBE2TQ9NPD8 197 aaPredicted RBP12.91□□□□□ -0.34
CTSA-210ENST00000606000 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 DNMT3LQ9UJW3 386 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
CTSA-210ENST00000606000 VPS13AQ96RL7 3174 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 YJEFN3A6XGL0 299 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 E7ENQ6 273 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 KAT7O95251 611 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
CTSA-210ENST00000606000 ZBED1O96006 694 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 RALAP11233 206 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 KRT5P13647 590 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 MTIF2P46199 727 aaKnown RBP12.9□□□□□ -0.34
CTSA-210ENST00000606000 PSEN1P49768 467 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 GAD2Q05329 585 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 DMC1Q14565 340 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 FBXO43Q4G163 708 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 PM20D1Q6GTS8 502 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 PMF1Q6P1K2 205 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 Q6ZNB5 142 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 PRR23BQ6ZRT6 265 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 LONP2Q86WA8 852 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 CCDC33Q8N5R6 958 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 USP33Q8TEY7 942 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 SLC35F5Q8WV83 523 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 EDEM1Q92611 657 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 BHMTQ93088 406 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 PNKPQ96T60 521 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 ARHGEF4Q9NR80 690 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 CLIC5Q9NZA1 410 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 SLC8A2Q9UPR5 921 aa12.9□□□□□ -0.34
CTSA-210ENST00000606000 SLC12A8A0AV02 714 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 BECN2A8MW95 431 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 NEDD8-MDP1E9PL57 170 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 TULP3O75386 442 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms