RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PM20D1Q6GTS8 502 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 LCLAT1Q6UWP7 414 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 PPM1KQ8N3J5 372 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 RBBP8NLQ8NC74 664 aaPredicted RBP11.23□□□□□ -0.61
TUBE1-210ENST00000604967 SLC35F5Q8WV83 523 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 CD101Q93033 1021 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 NT5C1BQ96P26 610 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 UBXN6Q9BZV1 441 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 FBXO44Q9H4M3 255 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
TUBE1-210ENST00000604967 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 PCDHGA2Q9Y5H1 932 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.23□□□□□ -0.61
TUBE1-210ENST00000604967 SPTBN4Q9H254 2564 aa11.23□□□□□ -0.61
TUBE1-210ENST00000604967 XPO1O14980 1071 aaKnown RBP11.22□□□□□ -0.61
TUBE1-210ENST00000604967 P4HA2O15460 535 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 STC2O76061 302 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 NFATC1O95644 943 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 LMNAP02545 664 aaKnown RBP11.22□□□□□ -0.61
TUBE1-210ENST00000604967 PNMA6AP0CW24 399 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-210ENST00000604967 VDRP11473 427 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 RGS7P49802 495 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 PDE6CP51160 858 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 GCNT1Q02742 428 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 ADIGQ0VDE8 80 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 LRRC32Q14392 662 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 LPAL2Q16609 132 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 SGO2Q562F6 1265 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 DENND1BQ6P3S1 775 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 TRIM65Q6PJ69 517 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 RBM43Q6ZSC3 357 aaKnown RBP11.22□□□□□ -0.61
TUBE1-210ENST00000604967 HTR3DQ70Z44 454 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 MIB1Q86YT6 1006 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 KIAA1958Q8N8K9 716 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 NAT16Q8N8M0 369 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 MLKLQ8NB16 471 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 RPLP0P6Q8NHW5 317 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 USP33Q8TEY7 942 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 NUP62CLQ9H1M0 184 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 FAM124BQ9H5Z6 455 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-210ENST00000604967 TLR8Q9NR97 1041 aaKnown RBP11.22□□□□□ -0.61
TUBE1-210ENST00000604967 SAMSN1Q9NSI8 373 aaKnown RBP11.22□□□□□ -0.61
TUBE1-210ENST00000604967 TJP2Q9UDY2 1190 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 NAGPAQ9UK23 515 aa11.22□□□□□ -0.61
TUBE1-210ENST00000604967 EML5Q05BV3 1969 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 A0A0A0MRY4 1105 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 GNA14O95837 355 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 ZBED1O96006 694 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 FYNP06241 537 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 PAEPP09466 180 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 ADH5P11766 374 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.61
TUBE1-210ENST00000604967 PON1P27169 355 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 ATP5C1P36542 298 aaKnown RBP11.21□□□□□ -0.61
TUBE1-210ENST00000604967 KIR2DL1P43626 348 aaPredicted RBP11.21□□□□□ -0.61
TUBE1-210ENST00000604967 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 CCR3P51677 355 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 BCAT1P54687 386 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 SEC13P55735 322 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 KDSRQ06136 332 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 BST2Q10589 180 aaKnown RBP11.21□□□□□ -0.61
TUBE1-210ENST00000604967 KCNMA1Q12791 1236 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 EFEMP1Q12805 493 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.61
TUBE1-210ENST00000604967 CNGA2Q16280 664 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 C10orf120Q5SQS8 335 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 KLHDC10Q6PID8 442 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 C1orf228Q6PIY5 440 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 C11orf57Q6ZUT1 292 aaPredicted RBP11.21□□□□□ -0.61
TUBE1-210ENST00000604967 TOGARAM2Q6ZUX3 1019 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 SYNPOQ8N3V7 929 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 TTC39CQ8N584 583 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 WDTC1Q8N5D0 677 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 KCTD13Q8WZ19 329 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 EDEM1Q92611 657 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 SECISBP2LQ93073 1101 aaKnown RBP11.21□□□□□ -0.61
TUBE1-210ENST00000604967 HHIPQ96QV1 700 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 IER2Q9BTL4 223 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 PARD6AQ9NPB6 346 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 CLIC5Q9NZA1 410 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 CLEC4EQ9ULY5 219 aa11.21□□□□□ -0.61
TUBE1-210ENST00000604967 GFRA2O00451 464 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 HOXC11O43248 304 aaPredicted RBP11.2□□□□□ -0.62
TUBE1-210ENST00000604967 MSI1O43347 362 aaKnown RBP11.2□□□□□ -0.62
TUBE1-210ENST00000604967 ADAM23O75077 832 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 TULP3O75386 442 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 HMBSP08397 361 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 CISD3P0C7P0 127 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 LCP1P13796 627 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 DRD1P21728 446 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 HOXA6P31267 233 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 GPD2P43304 727 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 RPL34P49207 117 aaKnown RBP11.2□□□□□ -0.62
TUBE1-210ENST00000604967 DAOAP59103 153 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 YWHAGP61981 247 aaKnown RBP eCLIP11.2□□□□□ -0.62
TUBE1-210ENST00000604967 C2orf27AQ580R0 203 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 TMEM92Q6UXU6 159 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 CCDC33Q8N5R6 958 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms