RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 LRRIQ3A6PVS8 624 aaPredicted RBP17.97■□□□□ 0.47
PNKP-210ENST00000597965 H0Y626 953 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 TRIM16O95361 564 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 C4BPAP04003 597 aaKnown RBP17.97■□□□□ 0.47
PNKP-210ENST00000597965 CFIP05156 583 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 SYPP08247 313 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 SERPINF2P08697 491 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 FAM200BP0CF97 657 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 CHRM1P11229 460 aaPredicted RBP17.97■□□□□ 0.47
PNKP-210ENST00000597965 MAPK8P45983 427 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 CASP4P49662 377 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 MESP2Q0VG99 397 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 KLHDC10Q6PID8 442 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 SCARA5Q6ZMJ2 495 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 PAQR9Q6ZVX9 377 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 TMEM25Q86YD3 366 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 SFTPA1Q8IWL2 248 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 CHPFQ8IZ52 775 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 SLC2A14Q8TDB8 520 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 BBS2Q9BXC9 721 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 GZF1Q9H116 711 aaPredicted RBP17.97■□□□□ 0.47
PNKP-210ENST00000597965 PNPLA8Q9NP80 782 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 TMEM74BQ9NUR3 256 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 EXOC1Q9NV70 894 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 DNAJC17Q9NVM6 304 aaKnown RBP17.97■□□□□ 0.47
PNKP-210ENST00000597965 FRMD4BQ9Y2L6 1034 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 PCDHA5Q9Y5H7 936 aa17.97■□□□□ 0.47
PNKP-210ENST00000597965 TNRC6BQ9UPQ9 1833 aaKnown RBP17.96■□□□□ 0.47
PNKP-210ENST00000597965 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 CACNG3O60359 315 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 KIF20AO95235 890 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 MYL1P05976 194 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 IRF1P10914 325 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 AFMP43652 599 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 PSEN1P49768 467 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 MAP3K7CLP57077 242 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 ZNF33AQ06730 810 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 CUL4BQ13620 913 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 SYCP2LQ5T4T6 812 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 DEFB124Q8NES8 71 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 TMC2Q8TDI7 906 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 CDK5RAP1Q96SZ6 601 aaKnown RBP17.96■□□□□ 0.47
PNKP-210ENST00000597965 SCNM1Q9BWG6 230 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 FAM124BQ9H5Z6 455 aaPredicted RBP17.96■□□□□ 0.47
PNKP-210ENST00000597965 CYLDQ9NQC7 956 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 MARK1Q9P0L2 795 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 SCML2Q9UQR0 700 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 ZNF510Q9Y2H8 683 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 ASCC3Q8N3C0 2202 aaKnown RBP17.96■□□□□ 0.47
PNKP-210ENST00000597965 CHD6Q8TD26 2715 aa17.96■□□□□ 0.47
PNKP-210ENST00000597965 GON4LQ3T8J9 2241 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 A0A1W2PQD8 194 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 ANTXRLA6NF34 631 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 NEDD8-MDP1E9PL57 170 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 GFRA2O00451 464 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 PDXKO00764 312 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 NPC1O15118 1278 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 OPHN1O60890 802 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 SLFN14P0C7P3 912 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 TYRP14679 529 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 GABRG2P18507 467 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 ITPKAP23677 461 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 PLA2G4AP47712 749 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 ZNF132P52740 706 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 NDST1P52848 882 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 ZACNQ401N2 412 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 RESP18Q5W5W9 173 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 CCDC150Q8NCX0 1101 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 FOXJ1Q92949 421 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 SMOQ99835 787 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 DMAC2Q9NW81 257 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 SUSD2Q9UGT4 822 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 DNMT3LQ9UJW3 386 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 ZMIZ1Q9ULJ6 1067 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 WASF3Q9UPY6 502 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 NEUROG3Q9Y4Z2 214 aa17.95■□□□□ 0.46
PNKP-210ENST00000597965 CEP192Q8TEP8 1941 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 NDUFS2O75306 463 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 ASS1P00966 412 aaKnown RBP17.94■□□□□ 0.46
PNKP-210ENST00000597965 HSP90AA1P07900 732 aaKnown RBP17.94■□□□□ 0.46
PNKP-210ENST00000597965 CCDC130P13994 396 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 GNSP15586 552 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 SEMA3BQ13214 749 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 FRMD1Q8N878 549 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 IPO4Q8TEX9 1081 aaKnown RBP17.94■□□□□ 0.46
PNKP-210ENST00000597965 HNRNPABQ99729 332 aaKnown RBP17.94■□□□□ 0.46
PNKP-210ENST00000597965 GABRG3Q99928 467 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 GTPBP2Q9BX10 602 aaKnown RBP17.94■□□□□ 0.46
PNKP-210ENST00000597965 KLF16Q9BXK1 252 aaPredicted RBP17.94■□□□□ 0.46
PNKP-210ENST00000597965 ZDHHC4Q9NPG8 344 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 USP25Q9UHP3 1055 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 PCDHA7Q9UN72 937 aa17.94■□□□□ 0.46
PNKP-210ENST00000597965 FAM208BQ5VWN6 2430 aa17.93■□□□□ 0.46
PNKP-210ENST00000597965 PCNX2A6NKB5 2137 aa17.93■□□□□ 0.46
PNKP-210ENST00000597965 A0A1W2PQF6 199 aa17.93■□□□□ 0.46
PNKP-210ENST00000597965 ARHGAP33O14559 1287 aa17.93■□□□□ 0.46
PNKP-210ENST00000597965 MAPK13O15264 365 aa17.93■□□□□ 0.46
PNKP-210ENST00000597965 CALUO43852 315 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms