RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 SLC7A9P82251 487 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ZXDBP98169 803 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ARID5AQ03989 594 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 FCHO2Q0JRZ9 810 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 EFEMP1Q12805 493 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ZNF268Q14587 947 aaPredicted RBP11.64□□□□□ -0.55
LIG1-211ENST00000596457 ZNF77Q15935 545 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 SNX30Q5VWJ9 437 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
LIG1-211ENST00000596457 RSRC2Q7L4I2 434 aaKnown RBP11.64□□□□□ -0.55
LIG1-211ENST00000596457 FAM71AQ8IYT1 594 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ARHGAP18Q8N392 663 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 KCTD13Q8WZ19 329 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 EDEM1Q92611 657 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ERGIC2Q96RQ1 377 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 LINC00597Q9H2U6 94 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 TBC1D17Q9HA65 648 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.64□□□□□ -0.55
LIG1-211ENST00000596457 GTSE1Q9NYZ3 720 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 ARHGAP26Q9UNA1 814 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 WNT6Q9Y6F9 365 aa11.64□□□□□ -0.55
LIG1-211ENST00000596457 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
LIG1-211ENST00000596457 YJEFN3A6XGL0 299 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 E7ENQ6 273 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 GABBR2O75899 941 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 CYP11B1P15538 503 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 SOX5P35711 763 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 STAT1P42224 750 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 ACADSBP45954 432 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 PSEN1P49768 467 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 DAOAP59103 153 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 USP4Q13107 963 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 RUNX3Q13761 415 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 UBXN2BQ14CS0 331 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 TADA2BQ86TJ2 420 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 NOP9Q86U38 636 aaKnown RBP11.63□□□□□ -0.55
LIG1-211ENST00000596457 MIB1Q86YT6 1006 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 C1orf131Q8NDD1 294 aaKnown RBP11.63□□□□□ -0.55
LIG1-211ENST00000596457 PRSS33Q8NF86 280 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 RNF139Q8WU17 664 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 GOLGA1Q92805 767 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 DNASE1L2Q92874 299 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 WBP2Q969T9 261 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 SHDQ96IW2 340 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 HSFY1Q96LI6 401 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 FOXQ1Q9C009 403 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 IFNKQ9P0W0 207 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 CYTH4Q9UIA0 394 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 DNMT3LQ9UJW3 386 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 NDRG2Q9UN36 371 aaKnown RBP11.63□□□□□ -0.55
LIG1-211ENST00000596457 CEP83Q9Y592 693 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 PIAS3Q9Y6X2 628 aa11.63□□□□□ -0.55
LIG1-211ENST00000596457 A0A1B0GTH6 734 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 SLC12A8A0AV02 714 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 E5RJQ4 531 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 GALR2O43603 387 aaPredicted RBP11.62□□□□□ -0.55
LIG1-211ENST00000596457 PI15O43692 258 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 OLFM2O95897 454 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 MMEP08473 750 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 TUBP50607 506 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 PRKCQQ04759 706 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 GOLGA8FQ08AF8 430 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 GOLGA8DPQ0D2H9 430 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 NR1I3Q14994 352 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 ITPRIPL2Q3MIP1 535 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 BSPRYQ5W0U4 402 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 PM20D1Q6GTS8 502 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 OR6B2Q6IFH4 312 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 DDX42Q86XP3 938 aaKnown RBP eCLIP11.62□□□□□ -0.55
LIG1-211ENST00000596457 WDTC1Q8N5D0 677 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 SLC20A1Q8WUM9 679 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 OSCP1Q8WVF1 389 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 FAM149B1Q96BN6 582 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 PPP1R13BQ96KQ4 1090 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 FAM83CQ9BQN1 747 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 KLF16Q9BXK1 252 aaPredicted RBP11.62□□□□□ -0.55
LIG1-211ENST00000596457 SYNCQ9H7C4 482 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 CYLDQ9NQC7 956 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 HPS4Q9NQG7 708 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 CNGB3Q9NQW8 809 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 SEPT11Q9NVA2 429 aaKnown RBP11.62□□□□□ -0.55
LIG1-211ENST00000596457 TJP2Q9UDY2 1190 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 SFMBT1Q9UHJ3 866 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 PCDHGC3Q9UN70 934 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 COL4A2P08572 1712 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 DCHS1Q96JQ0 3298 aa11.62□□□□□ -0.55
LIG1-211ENST00000596457 MIA3Q5JRA6 1907 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 KANSL1LA0AUZ9 987 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 FAM170BA6NMN3 283 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 FBXO21O94952 628 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 LTFP02788 710 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 DCNP07585 359 aaKnown RBP11.61□□□□□ -0.55
LIG1-211ENST00000596457 AOC1P19801 751 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 VCPP55072 806 aaKnown RBP11.61□□□□□ -0.55
LIG1-211ENST00000596457 JAM2P57087 298 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 STARD6P59095 220 aa11.61□□□□□ -0.55
LIG1-211ENST00000596457 PDCLQ13371 301 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms