RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 APOL6Q9BWW8 343 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 PLEKHA5Q9HAU0 1116 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 MRPL47Q9HD33 250 aaKnown RBP16.02■□□□□ 0.16
PNKP-204ENST00000594661 ETNK2Q9NVF9 386 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 PCDHGC3Q9UN70 934 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 SH3GLB1Q9Y371 365 aa16.02■□□□□ 0.16
PNKP-204ENST00000594661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.02■□□□□ 0.16
PNKP-204ENST00000594661 SCN10AQ9Y5Y9 1956 aa16.02■□□□□ 0.15
PNKP-204ENST00000594661 A0A0J9YVX5 310 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 PODXLO00592 558 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 PPEF2O14830 753 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 ATP9BO43861 1147 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 CILPO75339 1184 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 RECQL4O94761 1208 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 PROSCO94903 275 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 AKAP5P24588 427 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 RASSF2P50749 326 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 YARSP54577 528 aaKnown RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 PLTPP55058 493 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 MAP7Q14244 749 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 CCDC6Q16204 474 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 VSIG1Q86XK7 387 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 SLC4A11Q8NBS3 891 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 ELOVL4Q9GZR5 314 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 BRCA2P51587 3418 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 SEPT4O43236 478 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 PABPC4LP0CB38 370 aaKnown RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 ZFXP17010 805 aaPredicted RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 EPHB2P29323 1055 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 AXLP30530 894 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 CDH5P33151 784 aaPredicted RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 CCNFP41002 786 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 DRG2P55039 364 aaKnown RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 HPCAP84074 193 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 SLC34A1Q06495 639 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 LRRC14Q15048 493 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 KBTBD12Q3ZCT8 623 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 PPP1R2P3Q6NXS1 205 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 NCCRP1Q6ZVX7 275 aaPredicted RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 TMEM35BQ8NCS4 154 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 EPS8L3Q8TE67 593 aaKnown RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 NAT14Q8WUY8 206 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 C18orf25Q96B23 403 aaPredicted RBP16.01■□□□□ 0.15
PNKP-204ENST00000594661 RUNDC3BQ96NL0 473 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 CATSPER2Q96P56 530 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 SMC6Q96SB8 1091 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 GTF2IRD1Q9UHL9 959 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 HAO1Q9UJM8 370 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
PNKP-204ENST00000594661 SMIM23A6NLE4 172 aa16■□□□□ 0.15
PNKP-204ENST00000594661 FSCN2O14926 492 aa16■□□□□ 0.15
PNKP-204ENST00000594661 TPD52L2O43399 206 aaKnown RBP16■□□□□ 0.15
PNKP-204ENST00000594661 KPNA6O60684 536 aa16■□□□□ 0.15
PNKP-204ENST00000594661 STAU1O95793 577 aaKnown RBP16■□□□□ 0.15
PNKP-204ENST00000594661 RPL21P46778 160 aaKnown RBP16■□□□□ 0.15
PNKP-204ENST00000594661 KCNJ1P48048 391 aa16■□□□□ 0.15
PNKP-204ENST00000594661 NOGQ13253 232 aa16■□□□□ 0.15
PNKP-204ENST00000594661 ZBTB6Q15916 424 aa16■□□□□ 0.15
PNKP-204ENST00000594661 KHDC1Q4VXA5 237 aaKnown RBP16■□□□□ 0.15
PNKP-204ENST00000594661 SGO2Q562F6 1265 aa16■□□□□ 0.15
PNKP-204ENST00000594661 GDF6Q6KF10 455 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 KLC3Q6P597 504 aa16■□□□□ 0.15
PNKP-204ENST00000594661 VSTM1Q6UX27 236 aa16■□□□□ 0.15
PNKP-204ENST00000594661 ALKAL1Q6UXT8 129 aa16■□□□□ 0.15
PNKP-204ENST00000594661 C4orf50Q6ZRC1 276 aa16■□□□□ 0.15
PNKP-204ENST00000594661 NME8Q8N427 588 aa16■□□□□ 0.15
PNKP-204ENST00000594661 RSPH1Q8WYR4 309 aa16■□□□□ 0.15
PNKP-204ENST00000594661 WNT8BQ93098 351 aa16■□□□□ 0.15
PNKP-204ENST00000594661 CORO1BQ9BR76 489 aa16■□□□□ 0.15
PNKP-204ENST00000594661 BRD8Q9H0E9 1235 aa16■□□□□ 0.15
PNKP-204ENST00000594661 RNF39Q9H2S5 420 aa16■□□□□ 0.15
PNKP-204ENST00000594661 CYP3A43Q9HB55 503 aa16■□□□□ 0.15
PNKP-204ENST00000594661 CNTN3Q9P232 1028 aa16■□□□□ 0.15
PNKP-204ENST00000594661 DERAQ9Y315 318 aa16■□□□□ 0.15
PNKP-204ENST00000594661 SCN1AP35498 2009 aa16■□□□□ 0.15
PNKP-204ENST00000594661 TMEM120BA0PK00 339 aa16■□□□□ 0.15
PNKP-204ENST00000594661 RASGRF2O14827 1237 aa16■□□□□ 0.15
PNKP-204ENST00000594661 T-ENOLP0DO92 83 aa16■□□□□ 0.15
PNKP-204ENST00000594661 RARBP10826 455 aa16■□□□□ 0.15
PNKP-204ENST00000594661 P4HA1P13674 534 aa16■□□□□ 0.15
PNKP-204ENST00000594661 ELNP15502 786 aa16■□□□□ 0.15
PNKP-204ENST00000594661 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
PNKP-204ENST00000594661 CCND3P30281 292 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 CCDC92Q53HC0 331 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 SMYD5Q6GMV2 418 aa16■□□□□ 0.15
PNKP-204ENST00000594661 TAF2Q6P1X5 1199 aa16■□□□□ 0.15
PNKP-204ENST00000594661 ZDHHC24Q6UX98 284 aa16■□□□□ 0.15
PNKP-204ENST00000594661 CCDC80Q76M96 950 aa16■□□□□ 0.15
PNKP-204ENST00000594661 MARK2Q7KZI7 788 aaKnown RBP16■□□□□ 0.15
PNKP-204ENST00000594661 C12orf50Q8NA57 414 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 GADD45GIP1Q8TAE8 222 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 FBXO25Q8TCJ0 367 aa16■□□□□ 0.15
PNKP-204ENST00000594661 WDR60Q8WVS4 1066 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms