RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PDXKO00764 312 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 ACTN4O43707 911 aaKnown RBP23.94■■□□□ 1.42
SSBP4-203ENST00000593641 BEST1O76090 585 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 FAM200BP0CF97 657 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 ZNF252P-AS1Q0IIN9 211 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 SPDYCQ5MJ68 293 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 TMEM25Q86YD3 366 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 CRYBG2Q8N1P7 616 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 TMC2Q8TDI7 906 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 IMPG2Q9BZV3 1241 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 HMGXB4Q9UGU5 601 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 LSM7Q9UK45 103 aaKnown RBP23.94■■□□□ 1.42
SSBP4-203ENST00000593641 CFAP47Q6ZTR5 3102 aa23.94■■□□□ 1.42
SSBP4-203ENST00000593641 PCNX2A6NKB5 2137 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 CDX4O14627 284 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-203ENST00000593641 GIPC1O14908 333 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 IKBKBO14920 756 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 ASS1P00966 412 aaKnown RBP23.93■■□□□ 1.42
SSBP4-203ENST00000593641 DNM1Q05193 864 aaKnown RBP23.93■■□□□ 1.42
SSBP4-203ENST00000593641 MAP7D1Q3KQU3 841 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 UAP1L1Q3KQV9 507 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 LYSMD4Q5XG99 296 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 GRAMD4Q6IC98 578 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 SV2AQ7L0J3 742 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 SYT12Q8IV01 421 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 C12orf29Q8N999 325 aa23.93■■□□□ 1.42
SSBP4-203ENST00000593641 XPO6Q96QU8 1125 aaKnown RBP23.93■■□□□ 1.42
SSBP4-203ENST00000593641 ZBTB24O43167 697 aaPredicted RBP23.92■■□□□ 1.42
SSBP4-203ENST00000593641 CALUO43852 315 aaPredicted RBP23.92■■□□□ 1.42
SSBP4-203ENST00000593641 MYL1P05976 194 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 HOXB2P14652 356 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 CSRP1P21291 193 aaKnown RBP23.92■■□□□ 1.42
SSBP4-203ENST00000593641 ADORA2BP29275 332 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 ATP5C1P36542 298 aaKnown RBP23.92■■□□□ 1.42
SSBP4-203ENST00000593641 PTGER3P43115 390 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 ASPAP45381 313 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 SPOPLQ6IQ16 392 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 HTR3DQ70Z44 454 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 FRMD1Q8N878 549 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 WBP2Q969T9 261 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 BBS2Q9BXC9 721 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 DNAJC17Q9NVM6 304 aaKnown RBP23.92■■□□□ 1.42
SSBP4-203ENST00000593641 USP25Q9UHP3 1055 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 MBD1Q9UIS9 605 aaPredicted RBP23.92■■□□□ 1.42
SSBP4-203ENST00000593641 RCOR1Q9UKL0 485 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 FRYQ5TBA9 3013 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 CACNA1EQ15878 2313 aa23.92■■□□□ 1.42
SSBP4-203ENST00000593641 NEDD8-MDP1E9PL57 170 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 AP5Z1O43299 807 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 KIF20AO95235 890 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 HLA-DRAP01903 254 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 CEACAM1P13688 526 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 NTSR1P30989 418 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 FOXC1Q12948 553 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 SDE2Q6IQ49 451 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 JAKMIP2Q96AA8 810 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 CYLDQ9NQC7 956 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 SCML2Q9UQR0 700 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 STARD13Q9Y3M8 1113 aa23.91■■□□□ 1.42
SSBP4-203ENST00000593641 ADAMTS9Q9P2N4 1935 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 ATXN2Q99700 1313 aaKnown RBP23.9■■□□□ 1.42
SSBP4-203ENST00000593641 TBX18O95935 607 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 PFKFB1P16118 471 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 PGFP49763 221 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 RPL6Q02878 288 aaKnown RBP23.9■■□□□ 1.42
SSBP4-203ENST00000593641 PKP1Q13835 747 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 SLC36A4Q6YBV0 504 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 CLEC20AQ6ZU45 233 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 CHPFQ8IZ52 775 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 CCDC47Q96A33 483 aaKnown RBP23.9■■□□□ 1.42
SSBP4-203ENST00000593641 HNRNPABQ99729 332 aaKnown RBP23.9■■□□□ 1.42
SSBP4-203ENST00000593641 KLF16Q9BXK1 252 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-203ENST00000593641 DNAI2Q9GZS0 605 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.9■■□□□ 1.42
SSBP4-203ENST00000593641 WDR35Q9P2L0 1181 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 PCDHA5Q9Y5H7 936 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 ZFHX4Q86UP3 3567 aa23.9■■□□□ 1.42
SSBP4-203ENST00000593641 A0A1B0GVL5 298 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 TRIM24O15164 1050 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 CYP26A1O43174 497 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 CACNG3O60359 315 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 TYRP14679 529 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 GABRG2P18507 467 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 ACO1P21399 889 aaKnown RBP23.89■■□□□ 1.41
SSBP4-203ENST00000593641 HOXD12P35452 270 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 WASP42768 502 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 MAPK8P45983 427 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 VAMP7P51809 220 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 INCA1Q0VD86 236 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 TPGS1Q6ZTW0 290 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 GPRIN1Q7Z2K8 1008 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 CYFIP2Q96F07 1278 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 NT5C1AQ9BXI3 368 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 PNPLA8Q9NP80 782 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 TMEM74BQ9NUR3 256 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 MARK1Q9P0L2 795 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 CALCOCO1Q9P1Z2 691 aa23.89■■□□□ 1.41
SSBP4-203ENST00000593641 CHD6Q8TD26 2715 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 MAPK13O15264 365 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 CFIP05156 583 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms