RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 DDX42Q86XP3 938 aaKnown RBP eCLIP19.66■□□□□ 0.74
MBD1-223ENST00000590215 SCUBE3Q8IX30 993 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 FAM83CQ9BQN1 747 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 ANP32EQ9BTT0 268 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 RBSNQ9H1K0 784 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 BRD9Q9H8M2 597 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 ABCC13Q9NSE7 274 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 THG1LQ9NWX6 298 aaKnown RBP19.66■□□□□ 0.74
MBD1-223ENST00000590215 DNMT3LQ9UJW3 386 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 KIF26AQ9ULI4 1882 aaPredicted RBP19.66■□□□□ 0.74
MBD1-223ENST00000590215 F5P12259 2224 aa19.66■□□□□ 0.74
MBD1-223ENST00000590215 LRRC53A6NM62 1247 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 PIK3R2O00459 728 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 NOMO3P69849 1222 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 MTF1Q14872 753 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 PTPN20Q4JDL3 420 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 TRIM72Q6ZMU5 477 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 BEND5Q7L4P6 421 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 YAF2Q8IY57 180 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 CLEC4CQ8WTT0 213 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 SYT11Q9BT88 431 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 KLF16Q9BXK1 252 aaPredicted RBP19.65■□□□□ 0.74
MBD1-223ENST00000590215 PDCL3Q9H2J4 239 aa19.65■□□□□ 0.74
MBD1-223ENST00000590215 HELZP42694 1942 aaKnown RBP19.64■□□□□ 0.74
MBD1-223ENST00000590215 LTFP02788 710 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 GABRB2P47870 512 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 MLLT6P55198 1093 aaPredicted RBP19.64■□□□□ 0.73
MBD1-223ENST00000590215 SNX16P57768 344 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 C10orf120Q5SQS8 335 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 BTBD8Q5XKL5 378 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 HFE2Q6ZVN8 426 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 OSCP1Q8WVF1 389 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 MIS12Q9H081 205 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 C11orf16Q9NQ32 467 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 OLA1Q9NTK5 396 aaKnown RBP19.64■□□□□ 0.73
MBD1-223ENST00000590215 SMPD4Q9NXE4 827 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 TJP2Q9UDY2 1190 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 NUDT5Q9UKK9 219 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 CAPN11Q9UMQ6 739 aa19.64■□□□□ 0.73
MBD1-223ENST00000590215 E2F8A0AVK6 867 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 TMEM221A6NGB7 291 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 M0R296 226 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 GREM1O60565 184 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 GPR37L1O60883 481 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 FYNP06241 537 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 GLI1P08151 1106 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 PRKCIP41743 596 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 ARID5AQ03989 594 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 PDGFRLQ15198 375 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 SFMBT2Q5VUG0 894 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 E4F1Q66K89 784 aaPredicted RBP19.63■□□□□ 0.73
MBD1-223ENST00000590215 MSANTD2Q6P1R3 559 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 BMP8AQ7Z5Y6 402 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 SYN2Q92777 582 aaPredicted RBP19.63■□□□□ 0.73
MBD1-223ENST00000590215 ZFYVE19Q96K21 471 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 PCDHB18PQ96TA0 734 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 NACA2Q9H009 215 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 NUCKS1Q9H1E3 243 aaKnown RBP19.63■□□□□ 0.73
MBD1-223ENST00000590215 GKN1Q9NS71 199 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 ASNSD1Q9NWL6 643 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 CFAP97Q9P2B7 532 aa19.63■□□□□ 0.73
MBD1-223ENST00000590215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.63■□□□□ 0.731e-8■■■□□ 14.7
MBD1-223ENST00000590215 KRBA1A5PL33 1030 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 MDM4O15151 490 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 AP5Z1O43299 807 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 ERBB2P04626 1255 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 GYPCP04921 128 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 UNGP13051 313 aaPredicted RBP19.62■□□□□ 0.73
MBD1-223ENST00000590215 ZBED6P86452 979 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 SLC44A4Q53GD3 710 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 IER5LQ5T953 404 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 CC2D1AQ6P1N0 951 aaPredicted RBP19.62■□□□□ 0.73
MBD1-223ENST00000590215 ZDHHC17Q8IUH5 632 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 VSTM4Q8IW00 320 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 OLIG1Q8TAK6 271 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 IPO4Q8TEX9 1081 aaKnown RBP19.62■□□□□ 0.73
MBD1-223ENST00000590215 AGPAT1Q99943 283 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 TRIM62Q9BVG3 475 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 C1QTNF1Q9BXJ1 281 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 HPS4Q9NQG7 708 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 ARHGEF3Q9NR81 526 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 MARCH2Q9P0N8 246 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 FBXL21Q9UKT6 434 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 COL4A2P08572 1712 aa19.62■□□□□ 0.73
MBD1-223ENST00000590215 ZDBF2Q9HCK1 2354 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 GLULP15104 373 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 SCNN1AP37088 669 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 COG7P83436 770 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 PRKCQQ04759 706 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 ASIC2Q16515 512 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 EML3Q32P44 896 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 NAA35Q5VZE5 725 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 SPECC1LQ69YQ0 1117 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 OLFML1Q6UWY5 402 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 HTR3DQ70Z44 454 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 RSRC2Q7L4I2 434 aaKnown RBP19.61■□□□□ 0.73
MBD1-223ENST00000590215 SLC26A9Q7LBE3 791 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 ERICH1Q86X53 443 aa19.61■□□□□ 0.73
MBD1-223ENST00000590215 ZNF397Q8NF99 534 aaPredicted RBP19.61■□□□□ 0.73
MBD1-223ENST00000590215 CPA5Q8WXQ8 436 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms