RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 LMNTD2Q8IXW0 634 aa17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 UBA3Q8TBC4 463 aa17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 RXFP2Q8WXD0 754 aa17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 RTP4Q96DX8 246 aa17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 HEXIM2Q96MH2 286 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 ZC3H7BQ9UGR2 993 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 PLLPQ9Y342 182 aa17.52■□□□□ 0.4
PRKCSH-205ENST00000587327 CXorf49A8MYA2 514 aaPredicted RBP17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 FCHO1O14526 889 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 KCNN4O15554 427 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 PRPSAP2O60256 369 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 RARBP10826 455 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 VDRP11473 427 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 IL4RP24394 825 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 TTLL12Q14166 644 aaPredicted RBP17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 C15orf59Q2T9L4 293 aaPredicted RBP17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 CELF3Q5SZQ8 465 aaKnown RBP17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 LGSNQ5TDP6 509 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 MAP7D3Q8IWC1 876 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 CXorf38Q8TB03 319 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 OPTNQ96CV9 577 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 POPDC2Q9HBU9 364 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 TNFSF13BQ9Y275 285 aa17.52■□□□□ 0.39
PRKCSH-205ENST00000587327 ANK1P16157 1881 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 LACTBL1A8MY62 500 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 E5RJQ4 531 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 PRKCHP24723 683 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 VHLP40337 213 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 GCLCP48506 637 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 RCN1Q15293 331 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 CCDC6Q16204 474 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 MUM1Q2TAK8 710 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 ILDR2Q71H61 639 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 CAND1Q86VP6 1230 aaKnown RBP17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 ZNF333Q96JL9 665 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 C7orf26Q96N11 449 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 MMP19Q99542 508 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 NMUR2Q9GZQ4 415 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 MINDY3Q9H8M7 445 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 CYP3A43Q9HB55 503 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 PLAC1Q9HBJ0 212 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.51■□□□□ 0.391e-6■□□□□ 10.8
PRKCSH-205ENST00000587327 KCNK4Q9NYG8 393 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 MGAMO43451 1857 aa17.51■□□□□ 0.39
PRKCSH-205ENST00000587327 EIF4E1BA6NMX2 242 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 NVLO15381 856 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.395e-10■■□□□ 12.1
PRKCSH-205ENST00000587327 PSEN1P49768 467 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 SESN3P58005 492 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 MRPS5P82675 430 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 MBTD1Q05BQ5 628 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 KRT81Q14533 505 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 PDK2Q15119 407 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 C9orf131Q5VYM1 1079 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 JADE1Q6IE81 842 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 PLPPR4Q7Z2D5 763 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 TRIM42Q8IWZ5 723 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 APBB2Q92870 758 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.395e-15■■■■■ 62.2
PRKCSH-205ENST00000587327 MPHOSPH6Q99547 160 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 VRTNQ9H8Y1 702 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 NMRK1Q9NWW6 199 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 ARMCX1Q9P291 453 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 I3L4J1 428 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 GPR25O00155 361 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 NOP56O00567 594 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 RFPL1O75677 317 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 KRT36O76013 467 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 IQCF3P0C7M6 154 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 OSBPP22059 807 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 RBL1P28749 1068 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 ATICP31939 592 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 MAGEA6P43360 314 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 MRPS35P82673 323 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 KCTD2Q14681 263 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 CDO1Q16878 200 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 SNX30Q5VWJ9 437 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 MAP1SQ66K74 1059 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 DPH6Q7L8W6 267 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 ALYREFQ86V81 257 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 PQLC3Q8N755 202 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 WDR60Q8WVS4 1066 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 TRAPPC12Q8WVT3 735 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 COPS5Q92905 334 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 PIWIL1Q96J94 861 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 MECRQ9BV79 373 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 KLC2Q9H0B6 622 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 HEY1Q9Y5J3 304 aa17.5■□□□□ 0.39
PRKCSH-205ENST00000587327 BCLAF3A2AJT9 711 aaKnown RBP17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 PIK3R2O00459 728 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 PSMG1O95456 288 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 APRTP07741 180 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 LINGO3P0C6S8 592 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 P4HA1P13674 534 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 TGM2P21980 687 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 BCAR1P56945 870 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 BST1Q10588 318 aa17.49■□□□□ 0.39
PRKCSH-205ENST00000587327 HSF5Q4G112 596 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms