RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 ZNF840PA6NDX5 716 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 NEMFO60524 1076 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 ABL1P00519 1130 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 MBL2P11226 248 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 ITGB6P18564 788 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 AFMP43652 599 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 MYL7Q01449 175 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 LINC00303Q3SY05 128 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 EARS2Q5JPH6 523 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 TMEM25Q86YD3 366 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 TMPRSS6Q8IU80 811 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 ELF4Q99607 663 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 ACE2Q9BYF1 805 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 BHMT2Q9H2M3 363 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 STON1Q9Y6Q2 735 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 CACNA1DQ01668 2161 aa13.53□□□□□ -0.24
SMARCA4-211ENST00000586921 CPLX1O14810 134 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 SLC16A4O15374 487 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 OAS1P00973 400 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 SFTPCP11686 197 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 CKMT2P17540 419 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 RPA1P27694 616 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 LSSP48449 732 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 BECN1Q14457 450 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 TMEM132DQ14C87 1099 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 KYAT1Q16773 422 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 SGO2Q562F6 1265 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 PRAMEF14Q5SWL7 426 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 SAP25Q8TEE9 199 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 CCDC97Q96F63 343 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 CCSER1Q9C0I3 900 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 POLR1BQ9H9Y6 1135 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 ASCL3Q9NQ33 180 aa13.52□□□□□ -0.25
SMARCA4-211ENST00000586921 YKT6O15498 198 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 CACNG3O60359 315 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 SYNCRIPO60506 623 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 USP12O75317 370 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 FAM87AP0C7U9 286 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 ACAT1P24752 427 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 CD27P26842 260 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 PPP3CCP48454 512 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 FOSBP53539 338 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 E2F1Q01094 437 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 INTS6LQ5JSJ4 861 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 BBS7Q8IWZ6 715 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 FUBP3Q96I24 572 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 XPO6Q96QU8 1125 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 HAPLN2Q9GZV7 340 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 GTF3C4Q9UKN8 822 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 SH3BP1Q9Y3L3 701 aa13.51□□□□□ -0.25
SMARCA4-211ENST00000586921 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 VILLO15195 856 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 HIP1RO75146 1068 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 FSBPO95073 299 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 ZNF132P52740 706 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 INHBCP55103 352 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 USP46P62068 366 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 GRIN1Q05586 938 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 SHBQ15464 509 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 CCDC142Q17RM4 750 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 ZSCAN23Q3MJ62 389 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 ARL13BQ3SXY8 428 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 SV2CQ496J9 727 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 DENND5BQ6ZUT9 1274 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 CD302Q8IX05 232 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 DAW1Q8N136 415 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 EXTL1Q92935 676 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 BIRC7Q96CA5 298 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 BICD1Q96G01 975 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 SPATA17Q96L03 361 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 PKMYT1Q99640 499 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 DDX43Q9NXZ2 648 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 EHD2Q9NZN4 543 aa13.5□□□□□ -0.25
SMARCA4-211ENST00000586921 ARID1BQ8NFD5 2236 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 ADRB2P07550 413 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 XBP1P17861 261 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 ACP1P24666 158 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 ACSL1P33121 698 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 MAGEA11P43364 429 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 BCAT1P54687 386 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 C8orf34Q49A92 452 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 FBXL16Q8N461 479 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 PDCL2Q8N4E4 241 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 SKA1Q96BD8 255 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 DEPDC7Q96QD5 511 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 SEMA3CQ99985 751 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 PLEKHB1Q9UF11 243 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-211ENST00000586921 TSPAN3O60637 253 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms