RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 GRSF1Q12849 480 aaKnown RBP eCLIP21.84■■□□□ 1.09
TOP3A-218ENST00000584669 SRSF5Q13243 272 aaKnown RBP21.84■■□□□ 1.09
TOP3A-218ENST00000584669 SIM2Q14190 667 aaPredicted RBP21.84■■□□□ 1.09
TOP3A-218ENST00000584669 PUM1Q14671 1186 aaKnown RBP eCLIP21.84■■□□□ 1.09
TOP3A-218ENST00000584669 EXOC3L4Q17RC7 722 aa21.84■■□□□ 1.09
TOP3A-218ENST00000584669 RSPO4Q2I0M5 234 aaPredicted RBP21.84■■□□□ 1.09
TOP3A-218ENST00000584669 EML3Q32P44 896 aa21.84■■□□□ 1.09
TOP3A-218ENST00000584669 VWA3BQ502W6 1294 aa21.84■■□□□ 1.09
TOP3A-218ENST00000584669 SCD5Q86SK9 330 aa21.84■■□□□ 1.09
TOP3A-218ENST00000584669 ENOX1Q8TC92 643 aaKnown RBP21.84■■□□□ 1.09
TOP3A-218ENST00000584669 UBXN6Q9BZV1 441 aa21.84■■□□□ 1.09
TOP3A-218ENST00000584669 KIAA1257Q9ULG3 409 aa21.84■■□□□ 1.09
TOP3A-218ENST00000584669 DMDP11532 3685 aa21.84■■□□□ 1.09
TOP3A-218ENST00000584669 K7ESF4 209 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 TBX18O95935 607 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 KRT5P13647 590 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 PON1P27169 355 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 SLC8A3P57103 927 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 PKDCCQ504Y2 493 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 RAB41Q5JT25 222 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 CCDC186Q7Z3E2 898 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 SYNPOQ8N3V7 929 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 GPR161Q8N6U8 529 aaKnown RBP21.83■■□□□ 1.09
TOP3A-218ENST00000584669 WBP2Q969T9 261 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 NACA2Q9H009 215 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 NDST4Q9H3R1 872 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 ECT2Q9H8V3 914 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 CYLDQ9NQC7 956 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 NUDT5Q9UKK9 219 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.83■■□□□ 1.09
TOP3A-218ENST00000584669 CNTN6Q9UQ52 1028 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 CACNA1AO00555 2505 aa21.83■■□□□ 1.09
TOP3A-218ENST00000584669 XPO1O14980 1071 aaKnown RBP21.82■■□□□ 1.08
TOP3A-218ENST00000584669 HOXC13P31276 330 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 TKTL1P51854 596 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 MFAP3P55082 362 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 AMPD2Q01433 879 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 STX1AQ16623 288 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 ARHGAP44Q17R89 818 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 TCP11X2Q5H9J9 407 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 LAIR1Q6GTX8 287 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 FSTL4Q6MZW2 842 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 LCLAT1Q6UWP7 414 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 CEP68Q76N32 757 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.82■■□□□ 1.08
TOP3A-218ENST00000584669 LONP2Q86WA8 852 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 CPA6Q8N4T0 437 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 NDRG1Q92597 394 aaKnown RBP21.82■■□□□ 1.08
TOP3A-218ENST00000584669 ATP2A3Q93084 1043 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 SIX2Q9NPC8 291 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 ANO10Q9NW15 660 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 APEX2Q9UBZ4 518 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 NAGPAQ9UK23 515 aa21.82■■□□□ 1.08
TOP3A-218ENST00000584669 AJAP1Q9UKB5 411 aaPredicted RBP21.82■■□□□ 1.08
TOP3A-218ENST00000584669 M0QYV0 167 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 MDM4O15151 490 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 HRO43593 1189 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 PAPSS2O95340 614 aaPredicted RBP21.81■■□□□ 1.08
TOP3A-218ENST00000584669 IRF1P10914 325 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 RARGP13631 454 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 SPEM2Q0P670 501 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 CNGA2Q16280 664 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 TMEM196Q5HYL7 178 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 NAIF1Q69YI7 327 aaPredicted RBP21.81■■□□□ 1.08
TOP3A-218ENST00000584669 PKN3Q6P5Z2 889 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 DDX42Q86XP3 938 aaKnown RBP eCLIP21.81■■□□□ 1.08
TOP3A-218ENST00000584669 ULBP1Q9BZM6 244 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.81■■□□□ 1.08
TOP3A-218ENST00000584669 TAB2Q9NYJ8 693 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 SDK1Q7Z5N4 2213 aa21.81■■□□□ 1.08
TOP3A-218ENST00000584669 SPTBN2O15020 2390 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 BECN2A8MW95 431 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 PES1O00541 588 aaKnown RBP21.8■■□□□ 1.08
TOP3A-218ENST00000584669 EGFP01133 1207 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 SETSIPP0DME0 302 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 GJA4P35212 333 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 ATP5C1P36542 298 aaKnown RBP21.8■■□□□ 1.08
TOP3A-218ENST00000584669 PLA2G4AP47712 749 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 LMNB2Q03252 620 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 ADIGQ0VDE8 80 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 CDKAL1Q5VV42 579 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 ENOSF1Q7L5Y1 443 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 P2RY13Q9BPV8 354 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 KLF16Q9BXK1 252 aaPredicted RBP21.8■■□□□ 1.08
TOP3A-218ENST00000584669 LRRC4Q9HBW1 653 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 PARD6AQ9NPB6 346 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 ACP6Q9NPH0 428 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 FANCLQ9NW38 375 aa21.8■■□□□ 1.08
TOP3A-218ENST00000584669 CDV3Q9UKY7 258 aaKnown RBP21.8■■□□□ 1.08
TOP3A-218ENST00000584669 E2F8A0AVK6 867 aa21.79■■□□□ 1.08
TOP3A-218ENST00000584669 TRDMT1O14717 391 aaKnown RBP21.79■■□□□ 1.08
TOP3A-218ENST00000584669 GABBR2O75899 941 aa21.79■■□□□ 1.08
TOP3A-218ENST00000584669 EEF1GP26641 437 aaKnown RBP21.79■■□□□ 1.08
TOP3A-218ENST00000584669 PXNP49023 591 aaPredicted RBP21.79■■□□□ 1.08
TOP3A-218ENST00000584669 RGS7P49802 495 aa21.79■■□□□ 1.08
TOP3A-218ENST00000584669 KCNMA1Q12791 1236 aa21.79■■□□□ 1.08
TOP3A-218ENST00000584669 C10orf120Q5SQS8 335 aa21.79■■□□□ 1.08
TOP3A-218ENST00000584669 CAVIN1Q6NZI2 390 aaKnown RBP21.79■■□□□ 1.08
TOP3A-218ENST00000584669 BHLHA9Q7RTU4 235 aa21.79■■□□□ 1.08
TOP3A-218ENST00000584669 SLC35F5Q8WV83 523 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms