RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 FIZ1Q96SL8 496 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 BBS2Q9BXC9 721 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 PCED1AQ9H1Q7 454 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 PRDM16Q9HAZ2 1276 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 KIAA1586Q9HCI6 787 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 CRTAC1Q9NQ79 661 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 COMMD8Q9NX08 183 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 STK17AQ9UEE5 414 aa8.97□□□□□ -0.97
SRSF1-207ENST00000584668 ZNF233A6NK53 670 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 GOLGA8CPA6NN73 597 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 COCHO43405 550 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 TNFSF14O43557 240 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 CBFA2T3O75081 653 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 ATP2C2O75185 946 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 TACC1O75410 805 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 PDGFRBP09619 1106 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 FAM163BP0C2L3 166 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 IRF1P10914 325 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 CHRM1P11229 460 aaPredicted RBP8.96□□□□□ -0.98
SRSF1-207ENST00000584668 TYRP14679 529 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 ADSSP30520 456 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 ARID5AQ03989 594 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 CYP4F3Q08477 520 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 DCAF12L1Q5VU92 463 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 ZNF605Q86T29 641 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 WDR49Q8IV35 697 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 BBS7Q8IWZ6 715 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 ADAM32Q8TC27 787 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 DNASE2BQ8WZ79 361 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 SLC39A7Q92504 469 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 PRCCQ92733 491 aaPredicted RBP8.96□□□□□ -0.98
SRSF1-207ENST00000584668 SMARCD1Q96GM5 515 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 TOE1Q96GM8 510 aaKnown RBP8.96□□□□□ -0.98
SRSF1-207ENST00000584668 TNIP3Q96KP6 325 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 MED10Q9BTT4 135 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 NUP58Q9BVL2 599 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 GPR174Q9BXC1 333 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 FBXO44Q9H4M3 255 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 DMAP1Q9NPF5 467 aaPredicted RBP8.96□□□□□ -0.98
SRSF1-207ENST00000584668 TLR8Q9NR97 1041 aaKnown RBP8.96□□□□□ -0.98
SRSF1-207ENST00000584668 OLFML3Q9NRN5 406 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 BLOC1S4Q9NUP1 217 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 INTS13Q9NVM9 706 aa8.96□□□□□ -0.98
SRSF1-207ENST00000584668 KALRNO60229 2985 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 BPTFQ12830 3046 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 GOLGA4Q13439 2230 aaKnown RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 TRABD2BA6NFA1 517 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 A8MXQ7 604 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 ATXN7O15265 892 aaPredicted RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 HCRTO43612 131 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 DFNA5O60443 496 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 PPP1R37O75864 691 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 LMO2P25791 158 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 CCT8P50990 548 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 CDH8P55286 799 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 MESP2Q0VG99 397 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 ORC1Q13415 861 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 TRPC3Q13507 836 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 CCDC142Q17RM4 750 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 HLA-BQ31612 363 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 SNX30Q5VWJ9 437 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 SV2BQ7L1I2 683 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 DYMQ7RTS9 669 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 ADAT2Q7Z6V5 191 aaKnown RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 SLCO6A1Q86UG4 719 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 B3GALNT2Q8NCR0 500 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 BAHD1Q8TBE0 780 aaPredicted RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 SNX19Q92543 992 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 SKA1Q96BD8 255 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 BBC3Q96PG8 261 aaPredicted RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 DNAI2Q9GZS0 605 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 PDE11AQ9HCR9 933 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 CACNA2D2Q9NY47 1150 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 WSB2Q9NYS7 404 aaPredicted RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 MARK1Q9P0L2 795 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 USP36Q9P275 1121 aaKnown RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 FTSJ1Q9UET6 329 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 SIX4Q9UIU6 781 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 RAD54BQ9Y620 910 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 PTPRJQ12913 1337 aa8.95□□□□□ -0.98
SRSF1-207ENST00000584668 TP53BP1Q12888 1972 aaPredicted RBP8.95□□□□□ -0.98
SRSF1-207ENST00000584668 TMEM131Q92545 1883 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 CKAP5Q14008 2032 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 GOLGA8IPA6NC78 632 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 ANTXRLA6NF34 631 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 GOLGA8JA6NMD2 632 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 TLR5O60602 858 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 CYBBP04839 570 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 P4HA1P13674 534 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 IDEP14735 1019 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 PTPN1P18031 435 aaKnown RBP8.94□□□□□ -0.98
SRSF1-207ENST00000584668 TNNI1P19237 187 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 MAOBP27338 520 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 SLC5A3P53794 718 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 SMAD1Q15797 465 aaKnown RBP8.94□□□□□ -0.98
SRSF1-207ENST00000584668 TPGS1Q6ZTW0 290 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 HTR3DQ70Z44 454 aa8.94□□□□□ -0.98
SRSF1-207ENST00000584668 TMPRSS12Q86WS5 348 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms