RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CAVIN2O95810 425 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 ATP1A3P13637 1013 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 SRSF5Q13243 272 aaKnown RBP26.2■■□□□ 1.78
TSEN54-209ENST00000583454 RUNX3Q13761 415 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 CNGA2Q16280 664 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 GOLGA7BQ2TAP0 167 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 TMEM196Q5HYL7 178 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 KLHDC7AQ5VTJ3 777 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 LCLAT1Q6UWP7 414 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 SLITRK1Q96PX8 696 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 EBF3Q9H4W6 596 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 DNAJC12Q9UKB3 198 aa26.2■■□□□ 1.78
TSEN54-209ENST00000583454 LGALS16A8MUM7 142 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 BECN2A8MW95 431 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 KRT5P13647 590 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 ARSAP15289 507 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 HOXA6P31267 233 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 STILQ15468 1287 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 ARHGAP44Q17R89 818 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 PKDCCQ504Y2 493 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 LAIR1Q6GTX8 287 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 FSTL4Q6MZW2 842 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 GPRIN1Q7Z2K8 1008 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 SECISBP2LQ93073 1101 aaKnown RBP26.19■■□□□ 1.78
TSEN54-209ENST00000583454 FBXO44Q9H4M3 255 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 PLCB1Q9NQ66 1216 aa26.19■■□□□ 1.78
TSEN54-209ENST00000583454 AJAP1Q9UKB5 411 aaPredicted RBP26.19■■□□□ 1.78
TSEN54-209ENST00000583454 SDK1Q7Z5N4 2213 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 ZDHHC11BP0C7U3 371 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 PFKLP17858 780 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 KIF11P52732 1056 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 IFRD2Q12894 506 aaPredicted RBP26.18■■□□□ 1.78
TSEN54-209ENST00000583454 FKBP15Q5T1M5 1219 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 SNX30Q5VWJ9 437 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 LONP2Q86WA8 852 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 PDZD8Q8NEN9 1154 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 FBXO32Q969P5 355 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 NAA15Q9BXJ9 866 aaKnown RBP26.18■■□□□ 1.78
TSEN54-209ENST00000583454 CBX8Q9HC52 389 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 HESX1Q9UBX0 185 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 GMEB2Q9UKD1 530 aa26.18■■□□□ 1.78
TSEN54-209ENST00000583454 TRDMT1O14717 391 aaKnown RBP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 CALCAP01258 141 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 BRD2P25440 801 aaKnown RBP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 BCAT1P54687 386 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 SLC8A3P57103 927 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 PDE4CQ08493 712 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 USP4Q13107 963 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 ZNF77Q15935 545 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 NAIF1Q69YI7 327 aaPredicted RBP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 HEATR6Q6AI08 1181 aaKnown RBP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 CYP2S1Q96SQ9 504 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 LSM14BQ9BX40 385 aaKnown RBP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 FBRSL1Q9HCM7 1045 aaKnown RBP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 CHORDC1Q9UHD1 332 aaPredicted RBP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.17■■□□□ 1.78
TSEN54-209ENST00000583454 SCML2Q9UQR0 700 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 USP3Q9Y6I4 520 aa26.17■■□□□ 1.78
TSEN54-209ENST00000583454 C2orf78A6NCI8 922 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 FOXN3O00409 490 aaPredicted RBP26.16■■□□□ 1.78
TSEN54-209ENST00000583454 XPO1O14980 1071 aaKnown RBP26.16■■□□□ 1.78
TSEN54-209ENST00000583454 UCHL3P15374 230 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 LMNB2Q03252 620 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 BST2Q10589 180 aaKnown RBP26.16■■□□□ 1.78
TSEN54-209ENST00000583454 SIM2Q14190 667 aaPredicted RBP26.16■■□□□ 1.78
TSEN54-209ENST00000583454 RAB41Q5JT25 222 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 PRR23BQ6ZRT6 265 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 PIGZQ86VD9 579 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 UBA3Q8TBC4 463 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 TRPC7Q9HCX4 862 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 SIK3Q9Y2K2 1263 aa26.16■■□□□ 1.78
TSEN54-209ENST00000583454 TRAV19A0A0A6YYK7 116 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 RETP07949 1114 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 SETSIPP0DME0 302 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 CNR2P34972 360 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 SPEM2Q0P670 501 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 MTF1Q14872 753 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 WDR5BQ86VZ2 330 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 FAM71AQ8IYT1 594 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 GANQ9H2C0 597 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 GMIPQ9P107 970 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 RAB23Q9ULC3 237 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 USP18Q9UMW8 372 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 FHOD1Q9Y613 1164 aa26.15■■□□□ 1.78
TSEN54-209ENST00000583454 TULP2O00295 520 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 OLFM2O95897 454 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 OAS1P00973 400 aaKnown RBP26.14■■□□□ 1.78
TSEN54-209ENST00000583454 USP17L7P0C7H9 530 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 HDCP19113 662 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 PLA2G4AP47712 749 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 PDE6CP51160 858 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 ATXN1P54253 815 aaKnown RBP26.14■■□□□ 1.78
TSEN54-209ENST00000583454 UBXN1Q04323 297 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 PDGFRLQ15198 375 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 CCDC186Q7Z3E2 898 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 ARL14EPQ8N8R7 260 aaPredicted RBP26.14■■□□□ 1.78
TSEN54-209ENST00000583454 SLC35F5Q8WV83 523 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 EZH1Q92800 747 aaPredicted RBP26.14■■□□□ 1.78
TSEN54-209ENST00000583454 ERGIC2Q96RQ1 377 aa26.14■■□□□ 1.78
TSEN54-209ENST00000583454 PRR5-ARHGAP8B1AHC4 643 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms