RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 E7ENQ6 273 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 K7EQS6 105 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 M0QYV0 167 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 XPO1O14980 1071 aaKnown RBP13.22□□□□□ -0.29
CBX1-206ENST00000581003 P4HA2O15460 535 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 KLKB1P03952 638 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 VDRP11473 427 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 ADH5P11766 374 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 KRT5P13647 590 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 LCP1P13796 627 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
CBX1-206ENST00000581003 ATP5C1P36542 298 aaKnown RBP13.22□□□□□ -0.29
CBX1-206ENST00000581003 BCAT1P54687 386 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 YWHAGP61981 247 aaKnown RBP eCLIP13.22□□□□□ -0.29
CBX1-206ENST00000581003 GCNT1Q02742 428 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 BST2Q10589 180 aaKnown RBP13.22□□□□□ -0.29
CBX1-206ENST00000581003 EFEMP1Q12805 493 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 PMF1Q6P1K2 205 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 DENND1BQ6P3S1 775 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 C1orf228Q6PIY5 440 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 TRIM65Q6PJ69 517 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 TTC39CQ8N584 583 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 EDEM1Q92611 657 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 BHMTQ93088 406 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
CBX1-206ENST00000581003 HHIPQ96QV1 700 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 UBE2TQ9NPD8 197 aaPredicted RBP13.22□□□□□ -0.29
CBX1-206ENST00000581003 ZSCAN32Q9NX65 697 aa13.22□□□□□ -0.29
CBX1-206ENST00000581003 MYH10P35580 1976 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 CFAP54Q96N23 3096 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 LILRB5O75023 590 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 STC2O76061 302 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 ZBED1O96006 694 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.29
CBX1-206ENST00000581003 PAEPP09466 180 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 MTIF2P46199 727 aaKnown RBP13.21□□□□□ -0.29
CBX1-206ENST00000581003 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.29
CBX1-206ENST00000581003 ARHGAP44Q17R89 818 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 MIIPQ5JXC2 388 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 EMC10Q5UCC4 262 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 DPY19L2P1Q6NXN4 242 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 LCLAT1Q6UWP7 414 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 TPGS1Q6ZTW0 290 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
CBX1-206ENST00000581003 DDX42Q86XP3 938 aaKnown RBP eCLIP13.21□□□□□ -0.29
CBX1-206ENST00000581003 HESX1Q9UBX0 185 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 TJP2Q9UDY2 1190 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 CYTH4Q9UIA0 394 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 PCDHGA2Q9Y5H1 932 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 FANCMQ8IYD8 2048 aa13.21□□□□□ -0.29
CBX1-206ENST00000581003 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
CBX1-206ENST00000581003 HRO43593 1189 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 HNRNPLP14866 589 aaKnown RBP eCLIP13.2□□□□□ -0.3
CBX1-206ENST00000581003 DRD1P21728 446 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 PON1P27169 355 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 PLA2G4AP47712 749 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 CETN1Q12798 172 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
CBX1-206ENST00000581003 ANO4Q32M45 955 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 PM20D1Q6GTS8 502 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 ZC3H14Q6PJT7 736 aaKnown RBP13.2□□□□□ -0.3
CBX1-206ENST00000581003 MAMSTRQ6ZN01 415 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 Q6ZNB5 142 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 HTR3DQ70Z44 454 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 ETFBKMTQ8IXQ9 262 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 CCDC33Q8N5R6 958 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 SLC35F5Q8WV83 523 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 ATRIPQ8WXE1 791 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 ERLEC1Q96DZ1 483 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 FAM124BQ9H5Z6 455 aaPredicted RBP13.2□□□□□ -0.3
CBX1-206ENST00000581003 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 SPHK2Q9NRA0 654 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 PLK2Q9NYY3 685 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 CLIC5Q9NZA1 410 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 SFMBT1Q9UHJ3 866 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 DNMT3LQ9UJW3 386 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 HCN2Q9UL51 889 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 SMG5Q9UPR3 1016 aaKnown RBP13.2□□□□□ -0.3
CBX1-206ENST00000581003 CNTN6Q9UQ52 1028 aa13.2□□□□□ -0.3
CBX1-206ENST00000581003 PIEZO1Q92508 2521 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 SLC12A8A0AV02 714 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
CBX1-206ENST00000581003 TULP3O75386 442 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 LETM1O95202 739 aaPredicted RBP13.19□□□□□ -0.3
CBX1-206ENST00000581003 PAPSS2O95340 614 aaPredicted RBP13.19□□□□□ -0.3
CBX1-206ENST00000581003 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
CBX1-206ENST00000581003 ADH1CP00326 375 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 SETSIPP0DME0 302 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 CORO1AP31146 461 aaKnown RBP13.19□□□□□ -0.3
CBX1-206ENST00000581003 DAOAP59103 153 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 NR1H3Q13133 447 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 CNGA2Q16280 664 aa13.19□□□□□ -0.3
CBX1-206ENST00000581003 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
CBX1-206ENST00000581003 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms