RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 KAT7O95251 611 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 VDRP11473 427 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 TKTL1P51854 596 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 KDSRQ06136 332 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 SRSF5Q13243 272 aaKnown RBP16.31■□□□□ 0.2
SF3B3-215ENST00000577085 DMC1Q14565 340 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 KLHDC10Q6PID8 442 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 PIGZQ86VD9 579 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 NAT16Q8N8M0 369 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 HHIPQ96QV1 700 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 KLF16Q9BXK1 252 aaPredicted RBP16.31■□□□□ 0.2
SF3B3-215ENST00000577085 SPHK2Q9NRA0 654 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
SF3B3-215ENST00000577085 OSER1Q9NX31 292 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 CLIC5Q9NZA1 410 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 NUDT5Q9UKK9 219 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 USP18Q9UMW8 372 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 CFAP54Q96N23 3096 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 MYO16Q9Y6X6 1858 aa16.31■□□□□ 0.2
SF3B3-215ENST00000577085 CCDC163A0A0D9SF12 145 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 PMM2O15305 246 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 HRO43593 1189 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 RPP40O75818 363 aaKnown RBP16.3■□□□□ 0.2
SF3B3-215ENST00000577085 APBB3O95704 486 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 AFPP02771 609 aaKnown RBP16.3■□□□□ 0.2
SF3B3-215ENST00000577085 GRIA2P42262 883 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 ID4P47928 161 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 SLC6A11P48066 632 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
SF3B3-215ENST00000577085 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 TPD52L1Q16890 204 aaPredicted RBP16.3■□□□□ 0.2
SF3B3-215ENST00000577085 HTR3DQ70Z44 454 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 SIX6OS1Q8N1H7 587 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 TSTD1Q8NFU3 115 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 XPO6Q96QU8 1125 aaKnown RBP16.3■□□□□ 0.2
SF3B3-215ENST00000577085 DEC1Q9P2X7 70 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 RWDD2AQ9UIY3 292 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 RASAL2Q9UJF2 1139 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 STRIP2Q9ULQ0 834 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 USP3Q9Y6I4 520 aa16.3■□□□□ 0.2
SF3B3-215ENST00000577085 TBC1D3BA6NDS4 549 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 NEDD8-MDP1E9PL57 170 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 K7EQS6 105 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
SF3B3-215ENST00000577085 MDM4O15151 490 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 ZBED1O96006 694 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 PAEPP09466 180 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 SETSIPP0DME0 302 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 YWHAGP61981 247 aaKnown RBP eCLIP16.29■□□□□ 0.2
SF3B3-215ENST00000577085 MRPS21P82921 87 aaKnown RBP16.29■□□□□ 0.2
SF3B3-215ENST00000577085 COG7P83436 770 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 PDE4CQ08493 712 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 EFEMP1Q12805 493 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 TTC30AQ86WT1 665 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 TMEM25Q86YD3 366 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 TRIM59Q8IWR1 403 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 UBA3Q8TBC4 463 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 USP33Q8TEY7 942 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 GAB3Q8WWW8 586 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
SF3B3-215ENST00000577085 BBS2Q9BXC9 721 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 WDR35Q9P2L0 1181 aa16.29■□□□□ 0.2
SF3B3-215ENST00000577085 AXIN1O15169 862 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 HOXC11O43248 304 aaPredicted RBP16.28■□□□□ 0.2
SF3B3-215ENST00000577085 RETP07949 1114 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 HMBSP08397 361 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 TIE1P35590 1138 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 TNFRSF4P43489 277 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 DGKEP52429 567 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 STILQ15468 1287 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 GAB4Q2WGN9 574 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 TPGS1Q6ZTW0 290 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 CACNA2D4Q7Z3S7 1137 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 SCD5Q86SK9 330 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 C12orf40Q86WS4 652 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 ZNF276Q8N554 614 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 CCDC33Q8N5R6 958 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 MLKLQ8NB16 471 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 RNF139Q8WU17 664 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 POLR3BQ9NW08 1133 aaPredicted RBP16.28■□□□□ 0.2
SF3B3-215ENST00000577085 MARCH2Q9P0N8 246 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 ZNF510Q9Y2H8 683 aa16.28■□□□□ 0.2
SF3B3-215ENST00000577085 M0QYV0 167 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 O00370 1275 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 TULP3O75386 442 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 ALDH1A2O94788 518 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 KLF8O95600 359 aaPredicted RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 KRT5P13647 590 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 LCP1P13796 627 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 HOXC13P31276 330 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 MARSP56192 900 aaKnown RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 GCNT1Q02742 428 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 LMNB2Q03252 620 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 SPEM2Q0P670 501 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 ADIGQ0VDE8 80 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 HSF5Q4G112 596 aaPredicted RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 RAB41Q5JT25 222 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 EOGTQ5NDL2 527 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms