RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CD72P21854 359 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 GDI1P31150 447 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 VCPP55072 806 aaKnown RBP8.3□□□□□ -1.08
CCDC40-215ENST00000576033 YWHAGP61981 247 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCDC40-215ENST00000576033 NOMO3P69849 1222 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 ZXDAP98168 799 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 TDGQ13569 410 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 RAB6CQ53S08 254 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 OTUD1Q5VV17 481 aaPredicted RBP8.3□□□□□ -1.08
CCDC40-215ENST00000576033 TRNP1Q6NT89 227 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 NYAP1Q6ZVC0 841 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 CACNA2D4Q7Z3S7 1137 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 MIB1Q86YT6 1006 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 SCUBE3Q8IX30 993 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 CCAR2Q8N163 923 aaKnown RBP8.3□□□□□ -1.08
CCDC40-215ENST00000576033 SIX6OS1Q8N1H7 587 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 TTC39CQ8N584 583 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 LEMD2Q8NC56 503 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 ELSPBP1Q96BH3 223 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 IQCDQ96DY2 449 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 SLITRK1Q96PX8 696 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 SYT11Q9BT88 431 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 RAB6CQ9H0N0 254 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 LRRC4Q9HBW1 653 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 PNPLA8Q9NP80 782 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 HPS4Q9NQG7 708 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 HEBP1Q9NRV9 189 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCDC40-215ENST00000576033 GTSE1Q9NYZ3 720 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 GDE1Q9NZC3 331 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 CALCOCO1Q9P1Z2 691 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 CFAP97Q9P2B7 532 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 UXTQ9UBK9 157 aaPredicted RBP8.3□□□□□ -1.08
CCDC40-215ENST00000576033 RASAL2Q9UJF2 1139 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 PCDHGC3Q9UN70 934 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 DUSP12Q9UNI6 340 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 SORCS3Q9UPU3 1222 aa8.3□□□□□ -1.08
CCDC40-215ENST00000576033 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCDC40-215ENST00000576033 TMCO5BA8MYB1 307 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 AKR1B15C9JRZ8 316 aaPredicted RBP8.29□□□□□ -1.08
CCDC40-215ENST00000576033 DCXO43602 365 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 GREM1O60565 184 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 ECI2O75521 394 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 HDCP19113 662 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 RFX1P22670 979 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 HOXC13P31276 330 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 CASP14P31944 242 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 AVPR1AP37288 418 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 STAT1P42224 750 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 PTK2Q05397 1052 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 MESP2Q0VG99 397 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 EFEMP1Q12805 493 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 MTF1Q14872 753 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 ASIC2Q16515 512 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 C10orf120Q5SQS8 335 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 HECTD3Q5T447 861 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 SYPL2Q5VXT5 272 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 CWF19L1Q69YN2 538 aaKnown RBP8.29□□□□□ -1.08
CCDC40-215ENST00000576033 OLFML1Q6UWY5 402 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 MMS22LQ6ZRQ5 1243 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 MTSS1LQ765P7 747 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 ZNF571Q7Z3V5 609 aaPredicted RBP8.29□□□□□ -1.08
CCDC40-215ENST00000576033 IRF2BP2Q7Z5L9 587 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 CNGA4Q8IV77 575 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 SFTPA1Q8IWL2 248 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 SIX5Q8N196 739 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 KCTD13Q8WZ19 329 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 DNAJC7Q99615 494 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 C11orf70Q9BRQ4 267 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 SLC4A5Q9BY07 1137 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 FOXQ1Q9C009 403 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 LINC00597Q9H2U6 94 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 EBF3Q9H4W6 596 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 FAM124BQ9H5Z6 455 aaPredicted RBP8.29□□□□□ -1.08
CCDC40-215ENST00000576033 TRPV4Q9HBA0 871 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 ZFP14Q9HCL3 533 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 TDP1Q9NUW8 608 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 SEPT11Q9NVA2 429 aaKnown RBP8.29□□□□□ -1.08
CCDC40-215ENST00000576033 SFMBT1Q9UHJ3 866 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 CAPN11Q9UMQ6 739 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 NAALADL1Q9UQQ1 740 aa8.29□□□□□ -1.08
CCDC40-215ENST00000576033 VPS13AQ96RL7 3174 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 A0A1W2PQJ5 194 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 USP27XA6NNY8 438 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 PI4K2BG5E9Z4 385 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 GOLGA8SH3BPF8 625 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 TRDMT1O14717 391 aaKnown RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 MED7O43513 233 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 FGF19O95750 216 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 SRFP11831 508 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 HNRNPH3P31942 346 aaKnown RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 KRT9P35527 623 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 GGCXP38435 758 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 RPL34P49207 117 aaKnown RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 ATXN1P54253 815 aaKnown RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 TERF1P54274 439 aa8.28□□□□□ -1.08
CCDC40-215ENST00000576033 ADKP55263 362 aaKnown RBP8.28□□□□□ -1.08
CCDC40-215ENST00000576033 CDR2Q01850 454 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms