RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 POLR2AP24928 1970 aaKnown RBP9.3□□□□□ -0.92
NCBP3-204ENST00000574911 ASB14A6NK59 587 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 ZNF487B1APH4 448 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 TRDMT1O14717 391 aaKnown RBP9.3□□□□□ -0.92
NCBP3-204ENST00000574911 MDM4O15151 490 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 PEX11AO75192 247 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 SETSIPP0DME0 302 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 OSBPP22059 807 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 WASHC2DQ5SRD0 308 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 FAM182AQ5T1J6 154 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 TAPT1Q6NXT6 567 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 SCYL2Q6P3W7 929 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 MAMDC4Q6UXC1 1216 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 MCUQ8NE86 351 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 MRPL45Q9BRJ2 306 aaKnown RBP9.3□□□□□ -0.92
NCBP3-204ENST00000574911 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 TUBB6Q9BUF5 446 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 SNRNP25Q9BV90 132 aaKnown RBP9.3□□□□□ -0.92
NCBP3-204ENST00000574911 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
NCBP3-204ENST00000574911 NKX1-2Q9UD57 310 aaPredicted RBP9.3□□□□□ -0.92
NCBP3-204ENST00000574911 RPL26L1Q9UNX3 145 aaKnown RBP9.3□□□□□ -0.92
NCBP3-204ENST00000574911 MTO1Q9Y2Z2 717 aaKnown RBP9.3□□□□□ -0.92
NCBP3-204ENST00000574911 CXorf49A8MYA2 514 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 KLF11O14901 512 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 GABBR2O75899 941 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 ZBED1O96006 694 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 GSTA2P09210 222 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 GNAZP19086 355 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 BGNP21810 368 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 EPHB2P29323 1055 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SDC4P31431 198 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 GRM5P41594 1212 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 ARFIP2P53365 341 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 PPIL2Q13356 520 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 GJC2Q5T442 439 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 MTHFD1LQ6UB35 978 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 C4orf22Q6V702 233 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 ARMCX2Q7L311 632 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 MAB21L3Q8N8X9 362 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SH3TC2Q8TF17 1288 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SLC35F5Q8WV83 523 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 TTC17Q96AE7 1141 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SKA1Q96BD8 255 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 DCPSQ96C86 337 aaKnown RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 PTCD3Q96EY7 689 aaKnown RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 KIF12Q96FN5 646 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 ZNF570Q96NI8 536 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 KLC2Q9H0B6 622 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 RNPEPL1Q9HAU8 725 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 ADARB2Q9NS39 739 aaKnown RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SLC5A4Q9NY91 659 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 HEY2Q9UBP5 337 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 ZC3H7BQ9UGR2 993 aaKnown RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 NME7Q9Y5B8 376 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 HEY1Q9Y5J3 304 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 TRIM49D1C9J1S8 452 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SNRPAP09012 282 aaKnown RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 DLDP09622 509 aaKnown RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 GM2AP17900 193 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 CCNFP41002 786 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 MAGEA3P43357 314 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 GCLCP48506 637 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SERPINB4P48594 390 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 HDAC4P56524 1084 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SLC8A3P57103 927 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 CDK16Q00536 496 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 FAXCQ5TGI0 409 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 CDHR3Q6ZTQ4 885 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SESTD1Q86VW0 696 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 CDKL3Q8IVW4 592 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SULF1Q8IWU6 871 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 ANKRD13AQ8IZ07 590 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SHCBP1Q8NEM2 672 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 LRRC39Q96DD0 335 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 C11orf84Q9BUA3 381 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 TMEM120AQ9BXJ8 343 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 NGRNQ9NPE2 291 aaKnown RBP9.29□□□□□ -0.92
NCBP3-204ENST00000574911 SMYD2Q9NRG4 433 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 MKS1Q9NXB0 559 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 DERAQ9Y315 318 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 PLXNA1Q9UIW2 1896 aa9.29□□□□□ -0.92
NCBP3-204ENST00000574911 A0A0G2JND7 137 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 RBM47A0AV96 593 aaKnown RBP9.28□□□□□ -0.92
NCBP3-204ENST00000574911 COPEO14579 308 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 PAPSS1O43252 624 aaPredicted RBP9.28□□□□□ -0.92
NCBP3-204ENST00000574911 RFPL1O75677 317 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 CALB2P22676 271 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 CLNS1AP54105 237 aaKnown RBP9.28□□□□□ -0.92
NCBP3-204ENST00000574911 KRT72Q14CN4 511 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 ZNF534Q76KX8 674 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 ACOT1Q86TX2 421 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 ZDHHC17Q8IUH5 632 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 SCUBE3Q8IX30 993 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 PPM1NQ8N819 430 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 ENDOVQ8N8Q3 282 aaKnown RBP9.28□□□□□ -0.92
NCBP3-204ENST00000574911 PPTC7Q8NI37 304 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 CCDC110Q8TBZ0 833 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 STK32AQ8WU08 396 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 NLRP7Q8WX94 980 aa9.28□□□□□ -0.92
NCBP3-204ENST00000574911 APBB2Q92870 758 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms