RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PPP1R2P41236 205 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 KIR2DL1P43626 348 aaPredicted RBP18.35■□□□□ 0.53
SMG6-214ENST00000573827 MARSP56192 900 aaKnown RBP18.35■□□□□ 0.53
SMG6-214ENST00000573827 STIM1Q13586 685 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 DMC1Q14565 340 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 PKDCCQ504Y2 493 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 KLHL10Q6JEL2 608 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 TRIM59Q8IWR1 403 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 GAB3Q8WWW8 586 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 KAT5Q92993 513 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 HINFPQ9BQA5 517 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 CLIC5Q9NZA1 410 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 EBF1Q9UH73 591 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 SLC8A2Q9UPR5 921 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 TPRP12270 2363 aaKnown RBP18.35■□□□□ 0.53
SMG6-214ENST00000573827 GON4LQ3T8J9 2241 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 KAT7O95251 611 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 IRF1P10914 325 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 TRIM21P19474 475 aaKnown RBP18.34■□□□□ 0.53
SMG6-214ENST00000573827 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
SMG6-214ENST00000573827 ID4P47928 161 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 PM20D1Q6GTS8 502 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 PRR23BQ6ZRT6 265 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 FAM160A2Q8N612 972 aaPredicted RBP18.34■□□□□ 0.53
SMG6-214ENST00000573827 ACDQ96AP0 544 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 PNKPQ96T60 521 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 SPHK2Q9NRA0 654 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 MARK1Q9P0L2 795 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 CTNND2Q9UQB3 1225 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 SH3BP1Q9Y3L3 701 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 ABCA7Q8IZY2 2146 aa18.34■□□□□ 0.53
SMG6-214ENST00000573827 O00370 1275 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 TRIM24O15164 1050 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 TULP3O75386 442 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 GABBR2O75899 941 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 KLKB1P03952 638 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 PSEN1P49768 467 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 GAD2Q05329 585 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 PDE4CQ08493 712 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 LRMPQ12912 555 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 C2orf27AQ580R0 203 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 EMC10Q5UCC4 262 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 RASSF3Q86WH2 238 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 TFAP2BQ92481 460 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 NAGPAQ9UK23 515 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 TSPAN16Q9UKR8 245 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 MMP17Q9ULZ9 603 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 CHD8Q9HCK8 2581 aa18.33■□□□□ 0.52
SMG6-214ENST00000573827 CEP295Q9C0D2 2601 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 RNF225M0QZC1 329 aaPredicted RBP18.32■□□□□ 0.52
SMG6-214ENST00000573827 P4HA2O15460 535 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 LRP3O75074 770 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 ADAM23O75077 832 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 STC2O76061 302 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 APBB3O95704 486 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 GRIA2P42262 883 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 ZNF132P52740 706 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 SEC13P55735 322 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 STX17P56962 302 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 UBE2HP62256 183 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 MRPS21P82921 87 aaKnown RBP18.32■□□□□ 0.52
SMG6-214ENST00000573827 GOLGA7BQ2TAP0 167 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 TMEM92Q6UXU6 159 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 KBTBD6Q86V97 674 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 GPR161Q8N6U8 529 aaKnown RBP18.32■□□□□ 0.52
SMG6-214ENST00000573827 IL17RCQ8NAC3 791 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 ZC3H10Q96K80 434 aaKnown RBP18.32■□□□□ 0.52
SMG6-214ENST00000573827 NACA2Q9H009 215 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 ARHGEF4Q9NR80 690 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 KIAA1468Q9P260 1216 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 DNMT3LQ9UJW3 386 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 GMEB2Q9UKD1 530 aa18.32■□□□□ 0.52
SMG6-214ENST00000573827 BICDL2A1A5D9 508 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 SGK1O00141 431 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 XPO1O14980 1071 aaKnown RBP18.31■□□□□ 0.52
SMG6-214ENST00000573827 AXIN1O15169 862 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 RPP40O75818 363 aaKnown RBP18.31■□□□□ 0.52
SMG6-214ENST00000573827 TBXAS1P24557 533 aaPredicted RBP18.31■□□□□ 0.52
SMG6-214ENST00000573827 TNFRSF4P43489 277 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 PLA2G4AP47712 749 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 KDSRQ06136 332 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 SPEM2Q0P670 501 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 PAK1Q13153 545 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 CRY1Q16526 586 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 CCDC40Q4G0X9 1142 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 C10orf120Q5SQS8 335 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 ARHGEF19Q8IW93 802 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 ALLCQ8N6M5 410 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 TRIML1Q8N9V2 468 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 CCDC26Q8TAB7 109 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
SMG6-214ENST00000573827 KREMEN1Q96MU8 473 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 DNAI2Q9GZS0 605 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 RAB23Q9ULC3 237 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 EPG5Q9HCE0 2579 aa18.31■□□□□ 0.52
SMG6-214ENST00000573827 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.3■□□□□ 0.52
SMG6-214ENST00000573827 CACNG3O60359 315 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 APODP05090 189 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 PAEPP09466 180 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 VDRP11473 427 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms