RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TIE1P35590 1138 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 PSEN1P49768 467 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 SCD5Q86SK9 330 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 CREBRFQ8IUR6 639 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 SFTPA1Q8IWL2 248 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 CCDC33Q8N5R6 958 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 GPR161Q8N6U8 529 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 TSTD1Q8NFU3 115 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 USP33Q8TEY7 942 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 CLSTN2Q9H4D0 955 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 SPHK2Q9NRA0 654 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 RASAL2Q9UJF2 1139 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 DNMT3LQ9UJW3 386 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 PCDHB4Q9Y5E5 795 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 AXIN1O15169 862 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 APBB3O95704 486 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 GNA14O95837 355 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 HMBSP08397 361 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 TKTL1P51854 596 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 DGKEP52429 567 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 BCAT1P54687 386 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 PDE4CQ08493 712 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 MESP2Q0VG99 397 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 EFEMP1Q12805 493 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 TMEM270Q6UE05 265 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 CLEC17AQ6ZS10 378 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 TPGS1Q6ZTW0 290 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 TMEM25Q86YD3 366 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 ARHGAP18Q8N392 663 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 FAM160A2Q8N612 972 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 UBA3Q8TBC4 463 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 GAB3Q8WWW8 586 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 RMDN1Q96DB5 314 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 CDK5RAP1Q96SZ6 601 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 UBXN6Q9BZV1 441 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 ZDHHC4Q9NPG8 344 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 LMBRD1Q9NUN5 540 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 CFAP54Q96N23 3096 aa13.35□□□□□ -0.27
NPLOC4-213ENST00000573519 MYH10P35580 1976 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 CCDC163A0A0D9SF12 145 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 TBC1D3BA6NDS4 549 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 TULP2O00295 520 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 XPO1O14980 1071 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 HOXC11O43248 304 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 TULP3O75386 442 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 KLF8O95600 359 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 FGFR1OPO95684 399 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 AFPP02771 609 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 RETP07949 1114 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 VDRP11473 427 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 GRIA2P42262 883 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 YWHAGP61981 247 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 MRPS21P82921 87 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 BST2Q10589 180 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 KCNH2Q12809 1159 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 KLHDC10Q6PID8 442 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 RRAGAQ7L523 313 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 SIX6OS1Q8N1H7 587 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 ALLCQ8N6M5 410 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 NDRG1Q92597 394 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 KAT5Q92993 513 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 BHMTQ93088 406 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 BBS2Q9BXC9 721 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 TPSD1Q9BZJ3 242 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 ULBP1Q9BZM6 244 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 PARD6AQ9NPB6 346 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 CLIC5Q9NZA1 410 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
NPLOC4-213ENST00000573519 P4HA2O15460 535 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 GREM1O60565 184 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 STC2O76061 302 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 ZBED1O96006 694 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 LCP1P13796 627 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 TYRP14679 529 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 LMNB2Q03252 620 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 ADIGQ0VDE8 80 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 RSPO4Q2I0M5 234 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 PREPLQ4J6C6 727 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 RAB41Q5JT25 222 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 EMC10Q5UCC4 262 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 ANO7Q6IWH7 933 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 KBTBD6Q86V97 674 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms