RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CERS4Q9HA82 394 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 COMMD8Q9NX08 183 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 EHD2Q9NZN4 543 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SCML2Q9UQR0 700 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 YIPF1Q9Y548 306 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 HELZP42694 1942 aaKnown RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 MYO9BQ13459 2157 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 H3BNC9 293 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 CES2O00748 559 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 CAPN9O14815 690 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 TRUB2O95900 331 aaKnown RBP10.62□□□□□ -0.71
SMG1-208ENST00000563448 PYGMP11217 842 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 NCAM1P13591 858 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 YWHAQP27348 245 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 MIPP30301 263 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 PCK1P35558 622 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 GJC1P36383 396 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 ATXN1P54253 815 aaKnown RBP10.62□□□□□ -0.71
SMG1-208ENST00000563448 HDAC4P56524 1084 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 YWHAGP61981 247 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMG1-208ENST00000563448 ZNF211Q13398 564 aaPredicted RBP10.62□□□□□ -0.71
SMG1-208ENST00000563448 SLC25A52Q3SY17 297 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 CEP295NLQ96MC4 621 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 PEBP4Q96S96 227 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 NGRNQ9NPE2 291 aaKnown RBP10.62□□□□□ -0.71
SMG1-208ENST00000563448 OSER1Q9NX31 292 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 SMARCAL1Q9NZC9 954 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 PCSK1NQ9UHG2 260 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 MAFFQ9ULX9 164 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 USP18Q9UMW8 372 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 C2orf16Q68DN1 1984 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 A0A1W2PQH9 124 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 PDE2AO00408 941 aaPredicted RBP10.62□□□□□ -0.71
SMG1-208ENST00000563448 ENDOD1O94919 500 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 ADH1AP07327 375 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 KLRC2P26717 231 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 ELF1P32519 619 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 RWDD2BP57060 319 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 RAB30Q15771 203 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 WHAMMP3Q1A5X7 153 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 LRRC38Q5VT99 294 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 BTBD8Q5XKL5 378 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 CYP4V2Q6ZWL3 525 aaPredicted RBP10.62□□□□□ -0.71
SMG1-208ENST00000563448 BEND5Q7L4P6 421 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 STRADAQ7RTN6 431 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 KATNAL2Q8IYT4 538 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 RASGEF1CQ8N431 466 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 GOLGA1Q92805 767 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 FBXO32Q969P5 355 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 TTLL2Q9BWV7 592 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 CARD6Q9BX69 1037 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 EMILIN2Q9BXX0 1053 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 CARD9Q9H257 536 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 ZWILCHQ9H900 591 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 ABCC13Q9NSE7 274 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 GMIPQ9P107 970 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 MSRAQ9UJ68 235 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 STAP1Q9ULZ2 295 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 INSL5Q9Y5Q6 135 aa10.62□□□□□ -0.71
SMG1-208ENST00000563448 DOCK4Q8N1I0 1966 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 TNRC18O15417 2968 aaPredicted RBP10.61□□□□□ -0.71
SMG1-208ENST00000563448 M0QYT0 321 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 PRRG1O14668 218 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 CEP104O60308 925 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 HMGA1P17096 107 aaKnown RBP10.61□□□□□ -0.71
SMG1-208ENST00000563448 ALDH1A3P47895 512 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 TWF1Q12792 350 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 TAF10Q12962 218 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 HADHQ16836 314 aaKnown RBP10.61□□□□□ -0.71
SMG1-208ENST00000563448 POLNQ7Z5Q5 900 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 MON1AQ86VX9 555 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 LRRN4CLQ8ND94 238 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 MICAL1Q8TDZ2 1067 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 KLHL11Q9NVR0 708 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 FBXW11Q9UKB1 542 aa10.61□□□□□ -0.71
SMG1-208ENST00000563448 MAGED2Q9UNF1 606 aaPredicted RBP10.61□□□□□ -0.71
SMG1-208ENST00000563448 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMG1-208ENST00000563448 CSH1P0DML2 217 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 CSH2P0DML3 217 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 RARAP10276 462 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 DESP17661 470 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 RGS19P49795 217 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 CLCN4P51793 760 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 SMTNL2Q2TAL5 461 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 KCNT1Q5JUK3 1230 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 PPP2R2DQ66LE6 453 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 SCYL2Q6P3W7 929 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 ANKS1BQ7Z6G8 1248 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 SLC7A14Q8TBB6 771 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 ADAM32Q8TC27 787 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 ACTRT1Q8TDG2 376 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 ACSF2Q96CM8 615 aaPredicted RBP10.6□□□□□ -0.71
SMG1-208ENST00000563448 PGAP3Q96FM1 320 aaPredicted RBP10.6□□□□□ -0.71
SMG1-208ENST00000563448 NCAPGQ9BPX3 1015 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 TRIM62Q9BVG3 475 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 RRN3Q9NYV6 651 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 PDE4DIPQ5VU43 2346 aa10.6□□□□□ -0.71
SMG1-208ENST00000563448 SYNJ2BP-COX16A0A087WUM0 186 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms