RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 CASP4P49662 377 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 MAP3K7CLP57077 242 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 ZNF33AQ06730 810 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 HNRNPDQ14103 355 aaKnown RBP9.69□□□□□ -0.86
HDDC3-204ENST00000559834 ATL3Q6DD88 541 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 SLC9A9Q8IVB4 645 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 CHPFQ8IZ52 775 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 TMC2Q8TDI7 906 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 TMEM174Q8WUU8 243 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 MYO18AQ92614 2054 aaKnown RBP9.69□□□□□ -0.86
HDDC3-204ENST00000559834 SMOQ99835 787 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 GTPBP2Q9BX10 602 aaKnown RBP9.69□□□□□ -0.86
HDDC3-204ENST00000559834 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
HDDC3-204ENST00000559834 ADAM33Q9BZ11 813 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
HDDC3-204ENST00000559834 FAM124BQ9H5Z6 455 aaPredicted RBP9.69□□□□□ -0.86
HDDC3-204ENST00000559834 CSNK1G1Q9HCP0 422 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 ZDHHC4Q9NPG8 344 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 CYLDQ9NQC7 956 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 DNAJC17Q9NVM6 304 aaKnown RBP9.69□□□□□ -0.86
HDDC3-204ENST00000559834 CFAP45Q9UL16 551 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 WASF3Q9UPY6 502 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 SCML2Q9UQR0 700 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 FRMD4BQ9Y2L6 1034 aa9.69□□□□□ -0.86
HDDC3-204ENST00000559834 PCNX2A6NKB5 2137 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 MYOFQ9NZM1 2061 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 KMT2BQ9UMN6 2715 aaPredicted RBP9.68□□□□□ -0.86
HDDC3-204ENST00000559834 NEDD8-MDP1E9PL57 170 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 H0Y626 953 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 GFRA2O00451 464 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 PDXKO00764 312 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 CACNG3O60359 315 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 NDUFS2O75306 463 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 BEST1O76090 585 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 KIF20AO95235 890 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 TRIM16O95361 564 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 TBX18O95935 607 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 FAM200BP0CF97 657 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 TYRP14679 529 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 GNSP15586 552 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SPINK2P20155 84 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 CASP1P29466 404 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 WASP42768 502 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 DGKGP49619 791 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 PSEN1P49768 467 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 NDST1P52848 882 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SIM1P81133 766 aaPredicted RBP9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SEMA3BQ13214 749 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 CUL4BQ13620 913 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 E2F5Q15329 346 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 ZACNQ401N2 412 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 PEAR1Q5VY43 1037 aaPredicted RBP9.68□□□□□ -0.86
HDDC3-204ENST00000559834 KLHDC10Q6PID8 442 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SCARA5Q6ZMJ2 495 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 TPGS1Q6ZTW0 290 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 PIP4P1Q86T03 277 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 DEFB119Q8N690 84 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 ZMIZ2Q8NF64 920 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SLC2A14Q8TDB8 520 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 IPO4Q8TEX9 1081 aaKnown RBP9.68□□□□□ -0.86
HDDC3-204ENST00000559834 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 HNRNPABQ99729 332 aaKnown RBP9.68□□□□□ -0.86
HDDC3-204ENST00000559834 IMPG2Q9BZV3 1241 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 DMAC2Q9NW81 257 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 MARK1Q9P0L2 795 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 CALCOCO1Q9P1Z2 691 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 SUSD2Q9UGT4 822 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 PCDHA7Q9UN72 937 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 ZNF510Q9Y2H8 683 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 NEUROG3Q9Y4Z2 214 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 PTPRDP23468 1912 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 HELZP42694 1942 aaKnown RBP9.68□□□□□ -0.86
HDDC3-204ENST00000559834 MYO16Q9Y6X6 1858 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 CHD8Q9HCK8 2581 aa9.68□□□□□ -0.86
HDDC3-204ENST00000559834 IGHV1OR15-9A0A0B4J2B8 117 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 A0A1W2PQD8 194 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 A0A1W2PQF6 199 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 ARHGAP33O14559 1287 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 NPC1O15118 1278 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 VNN1O95497 513 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 ASS1P00966 412 aaKnown RBP9.67□□□□□ -0.86
HDDC3-204ENST00000559834 NR3C1P04150 777 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 HSP90AA1P07900 732 aaKnown RBP9.67□□□□□ -0.86
HDDC3-204ENST00000559834 SLFN14P0C7P3 912 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 RALAP11233 206 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 CCDC130P13994 396 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 ACO1P21399 889 aaKnown RBP9.67□□□□□ -0.86
HDDC3-204ENST00000559834 ADORA2BP29275 332 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 CHKAP35790 457 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 ZNF132P52740 706 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 STK4Q13043 487 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 SLC14A1Q13336 389 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 WDR45BQ5MNZ6 344 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 RESP18Q5W5W9 173 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 EGFLAMQ63HQ2 1017 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms