RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
SPG11-207ENST00000558138 STARD6P59095 220 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 ARID5AQ03989 594 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 RAB41Q5JT25 222 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 IER5LQ5T953 404 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 SNX30Q5VWJ9 437 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 CWF19L1Q69YN2 538 aaKnown RBP9.42□□□□□ -0.9
SPG11-207ENST00000558138 PMF1Q6P1K2 205 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 SLC47A2Q86VL8 602 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 C1orf131Q8NDD1 294 aaKnown RBP9.42□□□□□ -0.9
SPG11-207ENST00000558138 PJA1Q8NG27 643 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 KCTD13Q8WZ19 329 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 HSFY1Q96LI6 401 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 LRRC3BQ96PB8 259 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 FUCA2Q9BTY2 467 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 LTB4R2Q9NPC1 389 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 PLCB1Q9NQ66 1216 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 TRPV5Q9NQA5 729 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 CYLDQ9NQC7 956 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 OLA1Q9NTK5 396 aaKnown RBP9.42□□□□□ -0.9
SPG11-207ENST00000558138 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
SPG11-207ENST00000558138 IL37Q9NZH6 218 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 TBC1D14Q9P2M4 693 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 CNTN6Q9UQ52 1028 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 DAAM1Q9Y4D1 1078 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 USP3Q9Y6I4 520 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 E2F8A0AVK6 867 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 OLFM2O95897 454 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 ADH1CP00326 375 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 LTFP02788 710 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 TPM3P06753 285 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 ZDHHC11BP0C7U3 371 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 CCDC172P0C7W6 258 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 NCAM1P13591 858 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 GLULP15104 373 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 CYP11B1P15538 503 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 AVPR2P30518 371 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 CTHP32929 405 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 PGFP49763 221 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 DAOAP59103 153 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 COG7P83436 770 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 GRSF1Q12849 480 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPG11-207ENST00000558138 PDCLQ13371 301 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 LRRC32Q14392 662 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 PON2Q15165 354 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 ANO4Q32M45 955 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 BSPRYQ5W0U4 402 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 OR6B2Q6IFH4 312 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 SCD5Q86SK9 330 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 RALGPS2Q86X27 583 aaPredicted RBP9.41□□□□□ -0.9
SPG11-207ENST00000558138 FAM71AQ8IYT1 594 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 TMEM105Q8N8V8 129 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 TMEM35BQ8NCS4 154 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 RIN3Q8TB24 985 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 CLEC4CQ8WTT0 213 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 SLC35F5Q8WV83 523 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 PPP1R13BQ96KQ4 1090 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 NELL2Q99435 816 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 ZSWIM1Q9BR11 485 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 TRIM62Q9BVG3 475 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 GANQ9H2C0 597 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 ECT2Q9H8V3 914 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 ABCC13Q9NSE7 274 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 SPATA6Q9NWH7 488 aaPredicted RBP9.41□□□□□ -0.9
SPG11-207ENST00000558138 OSER1Q9NX31 292 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 CLIC5Q9NZA1 410 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 MARCH2Q9P0N8 246 aa9.41□□□□□ -0.9
SPG11-207ENST00000558138 YJEFN3A6XGL0 299 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 E5RJQ4 531 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 E7ENQ6 273 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 PI15O43692 258 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 ADH5P11766 374 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 TCF3P15923 654 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 TARSP26639 723 aaKnown RBP9.4□□□□□ -0.9
SPG11-207ENST00000558138 CLCN1P35523 988 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 SOX5P35711 763 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 GPD2P43304 727 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 HARS2P49590 506 aaKnown RBP9.4□□□□□ -0.9
SPG11-207ENST00000558138 UBASH3AP57075 661 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 FANCCQ00597 558 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 IQCB1Q15051 598 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 MEA1Q16626 185 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 EML3Q32P44 896 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 PKDCCQ504Y2 493 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 PM20D1Q6GTS8 502 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 TPGS1Q6ZTW0 290 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 FMNL3Q8IVF7 1028 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 BBS7Q8IWZ6 715 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 SCUBE3Q8IX30 993 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 RNF214Q8ND24 703 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 IRGQQ8WZA9 623 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 ERGIC2Q96RQ1 377 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 PRRX2Q99811 253 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 FAM83CQ9BQN1 747 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 KLF16Q9BXK1 252 aaPredicted RBP9.4□□□□□ -0.9
SPG11-207ENST00000558138 DCLK3Q9C098 648 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 LINC00597Q9H2U6 94 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 LMAN1LQ9HAT1 526 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 HPS4Q9NQG7 708 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms