RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 RBM12Q9NTZ6 932 aaKnown RBP11.06□□□□□ -0.64
ACTN1-216ENST00000556083 CYP39A1Q9NYL5 469 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 SORCS3Q9UPU3 1222 aa11.06□□□□□ -0.64
ACTN1-216ENST00000556083 SYNCRIPO60506 623 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ACO1P21399 889 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 FGFR2P21802 821 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 EIF4BP23588 611 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 GUCY1A3Q02108 690 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 PRKAA1Q13131 559 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SEL1L3Q68CR1 1132 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 RBM43Q6ZSC3 357 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ABRAQ8N0Z2 381 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ERP27Q96DN0 273 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 WNK4Q96J92 1243 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SEZ6LQ9BYH1 1024 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 NPHS2Q9NP85 383 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 RPRD1BQ9NQG5 326 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 STMN3Q9NZ72 180 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 AKAP7Q9P0M2 348 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 H3BQF6 201 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ACKR2O00590 384 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 TRDMT1O14717 391 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 HMGCRP04035 888 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 CYP3A4P08684 503 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 IMPDH2P12268 514 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 MYL4P12829 197 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 CALB2P22676 271 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 DAB2P98082 770 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SMARCB1Q12824 385 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 LRRC14Q15048 493 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 GRTP1Q5TC63 336 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 B4GALNT2Q8NHY0 566 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 TMA16Q96EY4 203 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 MAGED4Q96JG8 741 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 AGXT2Q9BYV1 514 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SLC39A8Q9C0K1 460 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 L2HGDHQ9H9P8 463 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 NMRAL1Q9HBL8 299 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ABI2Q9NYB9 513 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 TRIM66O15016 1216 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 ADCY3O60266 1144 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 KATNA1O75449 491 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SERPIND1P05546 499 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SOX6P35712 828 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 IFNGR2P38484 337 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 RPL3P39023 403 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 RHOAP61586 193 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 GIT2Q14161 759 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SPANXN3Q5MJ09 141 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 LONP2Q86WA8 852 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 TUBGCP3Q96CW5 907 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 RMND5BQ96G75 393 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 SMARCD1Q96GM5 515 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 OXCT2Q9BYC2 517 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 AGO4Q9HCK5 861 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 MAN1C1Q9NR34 630 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 AP4E1Q9UPM8 1137 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 TNPO3Q9Y5L0 923 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 FOXN1O15353 648 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 FGF10O15520 208 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 CKMP06732 381 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 FDPSP14324 419 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 PTPN7P35236 360 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 FKBP1BP68106 108 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 MRPS25P82663 173 aaKnown RBP11.05□□□□□ -0.64
ACTN1-216ENST00000556083 NCF4Q15080 339 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 COBLL1Q53SF7 1204 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 LRRC8DQ7L1W4 858 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 LUZP2Q86TE4 346 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 KSR1Q8IVT5 923 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 AADATQ8N5Z0 425 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 CRYL1Q9Y2S2 319 aa11.05□□□□□ -0.64
ACTN1-216ENST00000556083 USP1O94782 785 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 MZF1P28698 734 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 C1DQ13901 141 aaKnown RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 TRIP10Q15642 601 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 PDPK2PQ6A1A2 396 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 TTI2Q6NXR4 508 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 SH3GL3Q99963 347 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 TRIM51Q9BSJ1 452 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 SPATC1LQ9H0A9 340 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 STARD7Q9NQZ5 370 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 CAB39Q9Y376 341 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 NPHP3-ACAD11A0A0J9YXS1 232 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 MGAT4DA6NG13 374 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 SRRM3A6NNA2 597 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 H3BRB1 525 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 RBAK-RBAKDNI3L0D1 243 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 MPP3Q13368 585 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 PTPN21Q16825 1174 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 ZC2HC1CQ53FD0 456 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms