RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 A0A0A0MRY4 1105 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-207ENST00000553290 K7EQS6 105 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 APODP05090 189 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 VDRP11473 427 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 BCAT1P54687 386 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
ACTN1-207ENST00000553290 STX17P56962 302 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 LRMPQ12912 555 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 C10orf120Q5SQS8 335 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 BTBD8Q5XKL5 378 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 SCD5Q86SK9 330 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 PIGZQ86VD9 579 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 UBR7Q8N806 425 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 USP33Q8TEY7 942 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 SRRTQ9BXP5 876 aaKnown RBP13.63□□□□□ -0.23
ACTN1-207ENST00000553290 TSPAN16Q9UKR8 245 aa13.63□□□□□ -0.23
ACTN1-207ENST00000553290 XPO1O14980 1071 aaKnown RBP13.62□□□□□ -0.23
ACTN1-207ENST00000553290 HOXC11O43248 304 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-207ENST00000553290 KAT7O95251 611 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 RETP07949 1114 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 PAEPP09466 180 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 CD19P15391 556 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 GRIA2P42262 883 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 TNFRSF4P43489 277 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 SLC6A11P48066 632 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 MRPS21P82921 87 aaKnown RBP13.62□□□□□ -0.23
ACTN1-207ENST00000553290 BST2Q10589 180 aaKnown RBP13.62□□□□□ -0.23
ACTN1-207ENST00000553290 KCNH2Q12809 1159 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 DMC1Q14565 340 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 CAMK4Q16566 473 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 HSF5Q4G112 596 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-207ENST00000553290 NUDT18Q6ZVK8 323 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 CEP68Q76N32 757 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 TTC30AQ86WT1 665 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 PPM1KQ8N3J5 372 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 LMO3Q8TAP4 145 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 WBP2Q969T9 261 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 ARHGEF4Q9NR80 690 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 EBF1Q9UH73 591 aa13.62□□□□□ -0.23
ACTN1-207ENST00000553290 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.62□□□□□ -0.23
ACTN1-207ENST00000553290 AXIN1O15169 862 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 GREM1O60565 184 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 LRP3O75074 770 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 RPP40O75818 363 aaKnown RBP13.61□□□□□ -0.23
ACTN1-207ENST00000553290 APBB3O95704 486 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 ZBED1O96006 694 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 AFPP02771 609 aaKnown RBP13.61□□□□□ -0.23
ACTN1-207ENST00000553290 SETSIPP0DME0 302 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 HOXC13P31276 330 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
ACTN1-207ENST00000553290 ID4P47928 161 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 PXNP49023 591 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-207ENST00000553290 TKTL1P51854 596 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 SEC13P55735 322 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 COG7P83436 770 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 GCNT1Q02742 428 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 PDE4CQ08493 712 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 SRSF5Q13243 272 aaKnown RBP13.61□□□□□ -0.23
ACTN1-207ENST00000553290 LPAL2Q16609 132 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 ANO4Q32M45 955 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 C2orf27AQ580R0 203 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 PM20D1Q6GTS8 502 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 TMEM270Q6UE05 265 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-207ENST00000553290 C12orf40Q86WS4 652 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 TMEM25Q86YD3 366 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 ETFBKMTQ8IXQ9 262 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 GAB3Q8WWW8 586 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 HHIPQ96QV1 700 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 LRRC4Q9HBW1 653 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 DEC1Q9P2X7 70 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 NUDT5Q9UKK9 219 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 MMP17Q9ULZ9 603 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 ZNF510Q9Y2H8 683 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 PCDHB4Q9Y5E5 795 aa13.61□□□□□ -0.23
ACTN1-207ENST00000553290 O00370 1275 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 MDM4O15151 490 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 STC2O76061 302 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 YWHAGP61981 247 aaKnown RBP eCLIP13.6□□□□□ -0.23
ACTN1-207ENST00000553290 KDSRQ06136 332 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 STILQ15468 1287 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 LCLAT1Q6UWP7 414 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 Q6ZNB5 142 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 CACNA2D4Q7Z3S7 1137 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 MIB1Q86YT6 1006 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 PHTF2Q8N3S3 785 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 NAT16Q8N8M0 369 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 MLKLQ8NB16 471 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 KCTD13Q8WZ19 329 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 XPO6Q96QU8 1125 aaKnown RBP13.6□□□□□ -0.23
ACTN1-207ENST00000553290 DCLK3Q9C098 648 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 POLR3BQ9NW08 1133 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-207ENST00000553290 WDR35Q9P2L0 1181 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms