RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CYP4F8P98187 520 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 PTK2Q05397 1052 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 INCA1Q0VD86 236 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 KCNMA1Q12791 1236 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 SMARCB1Q12824 385 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 GSE1Q14687 1217 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 DRAP1Q14919 205 aaPredicted RBP12.02□□□□□ -0.49
TMEM116-218ENST00000552839 TAF12Q16514 161 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 PLK5Q496M5 336 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 ARHGAP15Q53QZ3 475 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 ACOT1Q86TX2 421 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 B3GALNT2Q8NCR0 500 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 CPLX3Q8WVH0 158 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 KAT5Q92993 513 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 TMEM176AQ96HP8 235 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 MRFAP1L1Q96HT8 127 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 SEPT5Q99719 369 aaPredicted RBP12.02□□□□□ -0.49
TMEM116-218ENST00000552839 STK33Q9BYT3 514 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 SMG9Q9H0W8 520 aaKnown RBP12.02□□□□□ -0.49
TMEM116-218ENST00000552839 SDCBP2Q9H190 292 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 DUSP15Q9H1R2 295 aaPredicted RBP12.02□□□□□ -0.49
TMEM116-218ENST00000552839 GANQ9H2C0 597 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 TASP1Q9H6P5 420 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 SIX2Q9NPC8 291 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 GKN1Q9NS71 199 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 FAM49BQ9NUQ9 324 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 ZNHIT6Q9NWK9 470 aaKnown RBP12.02□□□□□ -0.49
TMEM116-218ENST00000552839 HESX1Q9UBX0 185 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 WASF3Q9UPY6 502 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 LUC7L2Q9Y383 392 aaKnown RBP12.02□□□□□ -0.49
TMEM116-218ENST00000552839 PCDHB5Q9Y5E4 795 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 ITIH6Q6UXX5 1313 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 BAHCC1Q9P281 2608 aa12.02□□□□□ -0.49
TMEM116-218ENST00000552839 FAM208BQ5VWN6 2430 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 OTOL1A6NHN0 477 aaPredicted RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 F8VZ95 297 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 TRDMT1O14717 391 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 THAP12O43422 761 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 ADCY5O95622 1261 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 FGF19O95750 216 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 PTPN1P18031 435 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 SPINK2P20155 84 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 ADORA2BP29275 332 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 GNA15P30679 374 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 CDR1P51861 262 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 ARID5AQ03989 594 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 GRSF1Q12849 480 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 ASIC2Q16515 512 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 MGAT5BQ3V5L5 792 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 TDRD12Q587J7 1177 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 SFMBT2Q5VUG0 894 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 VSTM4Q8IW00 320 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 CAMKK1Q8N5S9 505 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 KDF1Q8NAX2 398 aaPredicted RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 OR10T2Q8NGX3 314 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 C2orf15Q8WU43 125 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 MYLPFQ96A32 169 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 KREMEN1Q96MU8 473 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 HHIPQ96QV1 700 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 LPIN3Q9BQK8 851 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 FAM83CQ9BQN1 747 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 EDEM2Q9BV94 578 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 DPEP3Q9H4B8 488 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 IL21Q9HBE4 155 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 FBRSL1Q9HCM7 1045 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 HPS4Q9NQG7 708 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 THG1LQ9NWX6 298 aaKnown RBP12.01□□□□□ -0.49
TMEM116-218ENST00000552839 HMGXB4Q9UGU5 601 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 CEP83Q9Y592 693 aa12.01□□□□□ -0.49
TMEM116-218ENST00000552839 C4orf47A7E2U8 309 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 GABRDO14764 452 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 DCLK1O15075 740 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 ATG13O75143 517 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 RNF40O75150 1001 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 GFPT2O94808 682 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 TOP3BO95985 862 aaKnown RBP12□□□□□ -0.49
TMEM116-218ENST00000552839 EGFP01133 1207 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 PAEPP09466 180 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 FAM200BP0CF97 657 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 VDRP11473 427 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 FERP16591 822 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 LMO2P25791 158 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 SOX5P35711 763 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 FOXC1Q12948 553 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 RUNX3Q13761 415 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 VEPH1Q14D04 833 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 STILQ15468 1287 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 TRIM68Q6AZZ1 485 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 ITIH5Q86UX2 942 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 CNGA4Q8IV77 575 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 SCN4BQ8IWT1 228 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 MYCBPAPQ8TBZ2 947 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 SPPL2BQ8TCT7 592 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 SHC3Q92529 594 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 SLC46A2Q9BY10 475 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 ELOVL4Q9GZR5 314 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms