RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 SYNCRIPO60506 623 aaKnown RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 CSO75390 466 aaKnown RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 OLFM2O95897 454 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 ITGB2P05107 769 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 ACAT1P24752 427 aaKnown RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 EPHA8P29322 1005 aaPredicted RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 SKOR1P84550 965 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 SSRP1Q08945 709 aaKnown RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 PDIA5Q14554 519 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 CALCRLQ16602 461 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 C3orf38Q5JPI3 329 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 RNF20Q5VTR2 975 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 DDX42Q86XP3 938 aaKnown RBP eCLIP12.04□□□□□ -0.48
GPN3-208ENST00000550974 SPATA2LQ8IUW3 424 aaPredicted RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 BBS7Q8IWZ6 715 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 TRIM22Q8IYM9 498 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.04□□□□□ -0.48
GPN3-208ENST00000550974 NSUN7Q8NE18 718 aaKnown RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 LEO1Q8WVC0 666 aaPredicted RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 BRF1Q92994 677 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 XPO6Q96QU8 1125 aaKnown RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 NCOA5Q9HCD5 579 aaKnown RBP12.04□□□□□ -0.48
GPN3-208ENST00000550974 TUFT1Q9NNX1 390 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 GTF3C4Q9UKN8 822 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 SATB2Q9UPW6 733 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 BOD1L1Q8NFC6 3051 aa12.04□□□□□ -0.48
GPN3-208ENST00000550974 USP9YO00507 2555 aaPredicted RBP12.03□□□□□ -0.48
GPN3-208ENST00000550974 GJB6O95452 261 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 CPA1P15085 419 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 COPAP53621 1224 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 USP46P62068 366 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 IRX6P78412 446 aaPredicted RBP12.03□□□□□ -0.48
GPN3-208ENST00000550974 MYL7Q01449 175 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 GRIN1Q05586 938 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 STRN3Q13033 797 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 CCDC142Q17RM4 750 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 ZNF787Q6DD87 383 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 JADE1Q6IE81 842 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 Q6ZUG5 572 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 SKA1Q96BD8 255 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 SGF29Q96ES7 293 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 SLC6A18Q96N87 628 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 TRIM9Q9C026 710 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 ARHGAP28Q9P2N2 729 aa12.03□□□□□ -0.48
GPN3-208ENST00000550974 LRRK2Q5S007 2527 aa12.02□□□□□ -0.48
GPN3-208ENST00000550974 YKT6O15498 198 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 TSPAN3O60637 253 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 SEMA4FO95754 770 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 OAS1P00973 400 aaKnown RBP12.02□□□□□ -0.49
GPN3-208ENST00000550974 IGHDP01880 384 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 TYRP14679 529 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 ARRB1P49407 418 aaPredicted RBP12.02□□□□□ -0.49
GPN3-208ENST00000550974 DGKGP49619 791 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 TAF6P49848 677 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 BCAT1P54687 386 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 RACK1P63244 317 aaKnown RBP12.02□□□□□ -0.49
GPN3-208ENST00000550974 DAB2P98082 770 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 MCL1Q07820 350 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 EARS2Q5JPH6 523 aaKnown RBP12.02□□□□□ -0.49
GPN3-208ENST00000550974 CDCP2Q5VXM1 449 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 SRRM1Q8IYB3 904 aaKnown RBP12.02□□□□□ -0.49
GPN3-208ENST00000550974 SLC46A1Q96NT5 459 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 ORAI3Q9BRQ5 295 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 BBS2Q9BXC9 721 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 HAPLN2Q9GZV7 340 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 ANO2Q9NQ90 1003 aa12.02□□□□□ -0.49
GPN3-208ENST00000550974 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.49
GPN3-208ENST00000550974 UTP20O75691 2785 aaKnown RBP12.01□□□□□ -0.49
GPN3-208ENST00000550974 SLC16A4O15374 487 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 CACNG3O60359 315 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 DEXIO95424 95 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 WNT1P04628 370 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 ZNF132P52740 706 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 ASIC1P78348 528 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 ENOX2Q16206 610 aaKnown RBP12.01□□□□□ -0.49
GPN3-208ENST00000550974 PROX2Q3B8N5 592 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 KRTAP21-3Q3LHN1 58 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 CFAP221Q4G0U5 840 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 INTS6LQ5JSJ4 861 aaKnown RBP12.01□□□□□ -0.49
GPN3-208ENST00000550974 SFMBT2Q5VUG0 894 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 FOXR1Q6PIV2 292 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 DENND5BQ6ZUT9 1274 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 ZNF564Q8TBZ8 553 aaPredicted RBP12.01□□□□□ -0.49
GPN3-208ENST00000550974 ACBD6Q9BR61 282 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 BTBD1Q9H0C5 482 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 GDF3Q9NR23 364 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 TMPRSS4Q9NRS4 437 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 LRWD1Q9UFC0 647 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 ATXN7L1Q9ULK2 861 aaPredicted RBP12.01□□□□□ -0.49
GPN3-208ENST00000550974 PLAAQ9Y263 795 aa12.01□□□□□ -0.49
GPN3-208ENST00000550974 RBM19Q9Y4C8 960 aaKnown RBP12.01□□□□□ -0.49
GPN3-208ENST00000550974 KPNA7A9QM74 516 aa12□□□□□ -0.49
GPN3-208ENST00000550974 CYP26A1O43174 497 aa12□□□□□ -0.49
GPN3-208ENST00000550974 OPA1O60313 960 aa12□□□□□ -0.49
GPN3-208ENST00000550974 IRF1P10914 325 aa12□□□□□ -0.49
GPN3-208ENST00000550974 PPP3CCP48454 512 aa12□□□□□ -0.49
GPN3-208ENST00000550974 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms