RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 GIPC1O14908 333 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 ACTN4O43707 911 aaKnown RBP11.47□□□□□ -0.57
PFDN5-210ENST00000550513 BEST1O76090 585 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 NR3C1P04150 777 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 FAM200BP0CF97 657 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 DPP6P42658 865 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 PTGER3P43115 390 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 ASPAP45381 313 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 IRX4P78413 519 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 FOXC1Q12948 553 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 STK4Q13043 487 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 SGSM1Q2NKQ1 1148 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 MAP7D1Q3KQU3 841 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 CEP135Q66GS9 1140 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 ATL3Q6DD88 541 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 GRAMD4Q6IC98 578 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 SPOPLQ6IQ16 392 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 UNC93AQ86WB7 457 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 SYT12Q8IV01 421 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 SLC9A9Q8IVB4 645 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 FRMD1Q8N878 549 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 KCNV2Q8TDN2 545 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 TMEM174Q8WUU8 243 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 TAF4BQ92750 862 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 SNX21Q969T3 373 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 WBP2Q969T9 261 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 JAKMIP2Q96AA8 810 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 IMPG2Q9BZV3 1241 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 KCTD10Q9H3F6 313 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 CSNK1G1Q9HCP0 422 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 DNAJC17Q9NVM6 304 aaKnown RBP11.47□□□□□ -0.57
PFDN5-210ENST00000550513 DMAC2Q9NW81 257 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 MBD1Q9UIS9 605 aaPredicted RBP11.47□□□□□ -0.57
PFDN5-210ENST00000550513 LSM7Q9UK45 103 aaKnown RBP11.47□□□□□ -0.57
PFDN5-210ENST00000550513 CFAP45Q9UL16 551 aa11.47□□□□□ -0.57
PFDN5-210ENST00000550513 PDXKO00764 312 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 CYP26A1O43174 497 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 AP5Z1O43299 807 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 CACNG3O60359 315 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 ASS1P00966 412 aaKnown RBP11.46□□□□□ -0.57
PFDN5-210ENST00000550513 HLA-DRAP01903 254 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 RPN1P04843 607 aaKnown RBP11.46□□□□□ -0.57
PFDN5-210ENST00000550513 SLFN14P0C7P3 912 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 CEACAM1P13688 526 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 GABRG2P18507 467 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 CSRP1P21291 193 aaKnown RBP11.46□□□□□ -0.57
PFDN5-210ENST00000550513 ADORA2BP29275 332 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 MAPK8P45983 427 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 PGFP49763 221 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 DNM1Q05193 864 aaKnown RBP11.46□□□□□ -0.57
PFDN5-210ENST00000550513 UAP1L1Q3KQV9 507 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 SPDYCQ5MJ68 293 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 PEAR1Q5VY43 1037 aaPredicted RBP11.46□□□□□ -0.57
PFDN5-210ENST00000550513 CLEC20AQ6ZU45 233 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 GPRIN1Q7Z2K8 1008 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 TMEM25Q86YD3 366 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 C12orf29Q8N999 325 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 PAGE5Q96GU1 130 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 XPO6Q96QU8 1125 aaKnown RBP11.46□□□□□ -0.57
PFDN5-210ENST00000550513 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 CALCOCO1Q9P1Z2 691 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 FRMD4BQ9Y2L6 1034 aa11.46□□□□□ -0.57
PFDN5-210ENST00000550513 PTPRBP23467 1997 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 CALUO43852 315 aaPredicted RBP11.45□□□□□ -0.58
PFDN5-210ENST00000550513 CFIP05156 583 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 MYL1P05976 194 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 TYRP14679 529 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 PFKFB1P16118 471 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 ENGP17813 658 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 ITPKAP23677 461 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 NTSR1P30989 418 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 HOXD12P35452 270 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 ATP5C1P36542 298 aaKnown RBP11.45□□□□□ -0.58
PFDN5-210ENST00000550513 WASP42768 502 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 RPL6Q02878 288 aaKnown RBP11.45□□□□□ -0.58
PFDN5-210ENST00000550513 INCA1Q0VD86 236 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 PKP1Q13835 747 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 EGFLAMQ63HQ2 1017 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 SLC23A3Q6PIS1 610 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 UNQ6494/PRO21346Q6UXR6 183 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 SLC36A4Q6YBV0 504 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 HTR3DQ70Z44 454 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 SV2AQ7L0J3 742 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 CRYBG2Q8N1P7 616 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 DEFB124Q8NES8 71 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 TWNKQ96RR1 684 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
PFDN5-210ENST00000550513 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.589e-15■■■■■ 186.3
PFDN5-210ENST00000550513 TMEM74BQ9NUR3 256 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 MARK1Q9P0L2 795 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 PILRBQ9UKJ0 227 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 SCML2Q9UQR0 700 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 PCDHA5Q9Y5H7 936 aa11.45□□□□□ -0.58
PFDN5-210ENST00000550513 CACNA1EQ15878 2313 aa11.44□□□□□ -0.58
PFDN5-210ENST00000550513 GON4LQ3T8J9 2241 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms