RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 LMF1Q96S06 567 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 JPH2Q9BR39 696 aaPredicted RBP6.02□□□□□ -1.45
PFDN5-209ENST00000550069 SOX7Q9BT81 388 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 RAB34Q9BZG1 259 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 HAPLN2Q9GZV7 340 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 MTIF3Q9H2K0 278 aaKnown RBP6.02□□□□□ -1.45
PFDN5-209ENST00000550069 SMARCAD1Q9H4L7 1026 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 PAXBP1Q9Y5B6 917 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 SQORQ9Y6N5 450 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 COL1A2P08123 1366 aa6.02□□□□□ -1.45
PFDN5-209ENST00000550069 ASTN1O14525 1302 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 NRCAMQ92823 1304 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 TRIP12Q14669 1992 aaPredicted RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 C2orf78A6NCI8 922 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 NPEPPSL1A6NEC2 478 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 K7ESM1 405 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 HAS3O00219 553 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 KIAA0355O15063 1070 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 PCDH8O95206 1070 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 IPO7O95373 1038 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 ASGR1P07306 291 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 MMP3P08254 477 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 EN2P19622 333 aaPredicted RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 RXRAP19793 462 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 U2AF2P26368 475 aaKnown RBP eCLIP6.01□□□□□ -1.452e-15■■■■■ 33.6
PFDN5-209ENST00000550069 HOXC8P31273 242 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 CASQ1P31415 396 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 KRT2P35908 639 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 CCT2P78371 535 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 MRPS9P82933 396 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 PURAQ00577 322 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 ARHGAP1Q07960 439 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 EFEMP1Q12805 493 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 ITGA7Q13683 1181 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 LRRC32Q14392 662 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 DHCR24Q15392 516 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 RILPL1Q5EBL4 403 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 FAM160B1Q5W0V3 765 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 ATL3Q6DD88 541 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 KIAA1841Q6NSI8 718 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 TCTN3Q6NUS6 607 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 TAF2Q6P1X5 1199 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 USP17L6PQ6QN14 398 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 NOL8Q76FK4 1167 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 PHYKPLQ8IUZ5 450 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 LYSMD2Q8IV50 215 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 FBXO16Q8IX29 292 aaPredicted RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 RPUSD2Q8IZ73 545 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 NME8Q8N427 588 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 SLC5A5Q92911 643 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 PAWRQ96IZ0 340 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 C8orf76Q96K31 380 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 C8orf49Q96NF6 230 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 PITHD1Q9GZP4 211 aaPredicted RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 CPVLQ9H3G5 476 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 AZI2Q9H6S1 392 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 SUDS3Q9H7L9 328 aaPredicted RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 CAAP1Q9H8G2 361 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 AGO3Q9H9G7 860 aaKnown RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 CD248Q9HCU0 757 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 TOPORSQ9NS56 1045 aaPredicted RBP6.01□□□□□ -1.45
PFDN5-209ENST00000550069 ERAP1Q9NZ08 941 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 COL20A1Q9P218 1284 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 SLC9A2Q9UBY0 812 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 RSPH14Q9UHP6 348 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 FBXO10Q9UK96 956 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 OAZ3Q9UMX2 235 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 EDARQ9UNE0 448 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 NR2E1Q9Y466 385 aa6.01□□□□□ -1.45
PFDN5-209ENST00000550069 IGKV6D-21A0A0A0MT36 114 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 PRSS38A1L453 326 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 IPO5O00410 1097 aaKnown RBP6□□□□□ -1.45
PFDN5-209ENST00000550069 MAGEB2O15479 319 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 ARHGAP6O43182 974 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 OPHN1O60890 802 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 EYA4O95677 639 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 GGPS1O95749 300 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 CLTBP09497 229 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 SETSIPP0DME0 302 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 MYCLP12524 364 aaPredicted RBP6□□□□□ -1.45
PFDN5-209ENST00000550069 CPA1P15085 419 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 KCNA2P16389 499 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 SCP2P22307 547 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 UBA1P22314 1058 aaKnown RBP6□□□□□ -1.45
PFDN5-209ENST00000550069 CD40P25942 277 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 HOXA13P31271 388 aaPredicted RBP6□□□□□ -1.45
PFDN5-209ENST00000550069 PRPHP41219 470 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 SOX10P56693 466 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 SNAP25P60880 206 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 ADAM8P78325 824 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 PHC1P78364 1004 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 SARNPP82979 210 aaKnown RBP6□□□□□ -1.45
PFDN5-209ENST00000550069 NFYCQ13952 458 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 ATP13A4Q4VNC1 1196 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 ARL6IP4Q66PJ3 421 aaKnown RBP6□□□□□ -1.45
PFDN5-209ENST00000550069 MIS18BP1Q6P0N0 1132 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 RINLQ6ZS11 566 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 SEPT14Q6ZU15 432 aa6□□□□□ -1.45
PFDN5-209ENST00000550069 USP30Q70CQ3 517 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms