RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 PI4KBQ9UBF8 816 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 HEY2Q9UBP5 337 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 AFF4Q9UHB7 1163 aaKnown RBP5.06□□□□□ -1.6
CCDC38-208ENST00000549876 DDX20Q9UHI6 824 aaKnown RBP5.06□□□□□ -1.6
CCDC38-208ENST00000549876 SMAD6O43541 496 aaKnown RBP5.05□□□□□ -1.6
CCDC38-208ENST00000549876 RGS10O43665 173 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 GCATO75600 419 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 RASSF9O75901 435 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 HGFP14210 728 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 IL1R1P14778 569 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 PTDSS1P48651 473 aaKnown RBP5.05□□□□□ -1.6
CCDC38-208ENST00000549876 COPB1P53618 953 aaKnown RBP5.05□□□□□ -1.6
CCDC38-208ENST00000549876 ITGA8P53708 1063 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 RPS16P62249 146 aaKnown RBP5.05□□□□□ -1.6
CCDC38-208ENST00000549876 ZNF91Q05481 1191 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 ARHGEF7Q14155 803 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 SEMA3AQ14563 771 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 PPP2R5AQ15172 486 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 ARHGAP29Q52LW3 1261 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 SESTD1Q86VW0 696 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 STK31Q9BXU1 1019 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 CHST8Q9H2A9 424 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 DHX36Q9H2U1 1008 aaKnown RBP5.05□□□□□ -1.6
CCDC38-208ENST00000549876 POT1Q9NUX5 634 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 TMEM184CQ9NVA4 438 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 MGAT4CQ9UBM8 478 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 RGS17Q9UGC6 210 aaPredicted RBP5.05□□□□□ -1.6
CCDC38-208ENST00000549876 EID1Q9Y6B2 187 aa5.05□□□□□ -1.6
CCDC38-208ENST00000549876 PSG1P11464 419 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 MYF5P13349 255 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 CREB1P16220 341 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 ZKSCAN1P17029 563 aaPredicted RBP5.04□□□□□ -1.6
CCDC38-208ENST00000549876 GATMP50440 423 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 CFHR1Q03591 330 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 SEC23BQ15437 767 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 C4orf46Q504U0 113 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 RNF220Q5VTB9 566 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 LIX1LQ8IVB5 337 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 FAM156AQ8NDB6 213 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 ZNF548Q8NEK5 533 aaPredicted RBP5.04□□□□□ -1.6
CCDC38-208ENST00000549876 IGFBPL1Q8WX77 278 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 LRTOMTQ8WZ04 291 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 APIPQ96GX9 242 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 CAMK1GQ96NX5 476 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 GAR1Q9NY12 217 aaKnown RBP5.04□□□□□ -1.6
CCDC38-208ENST00000549876 DKK4Q9UBT3 224 aa5.04□□□□□ -1.6
CCDC38-208ENST00000549876 NOTCH4Q99466 2003 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 LOC105371045A0A1W2PR82 267 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 H3BNX3 289 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 EXOC5O00471 708 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 CRYABP02511 175 aaKnown RBP5.03□□□□□ -1.6
CCDC38-208ENST00000549876 TXNP10599 105 aaKnown RBP5.03□□□□□ -1.6
CCDC38-208ENST00000549876 CYP19A1P11511 503 aaPredicted RBP5.03□□□□□ -1.6
CCDC38-208ENST00000549876 BTF3P20290 206 aaKnown RBP5.03□□□□□ -1.6
CCDC38-208ENST00000549876 MCM5P33992 734 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 CACNB3P54284 484 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 ID2Q02363 134 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 SLC29A2Q14542 456 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 CHST15Q7LFX5 561 aaPredicted RBP5.03□□□□□ -1.6
CCDC38-208ENST00000549876 KRT78Q8N1N4 520 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 METTL25Q8N6Q8 603 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 KAZALD1Q96I82 304 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 FAM204AQ9H8W3 233 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 TRIM36Q9NQ86 728 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 MID2Q9UJV3 735 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 HDAC9Q9UKV0 1011 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 ASAP1Q9ULH1 1129 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 SQORQ9Y6N5 450 aa5.03□□□□□ -1.6
CCDC38-208ENST00000549876 GTPBP1O00178 669 aaKnown RBP5.02□□□□□ -1.61
CCDC38-208ENST00000549876 RAB27BO00194 218 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 TPP1O14773 563 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 PIAS2O75928 621 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 RNF8O76064 485 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 HRGP04196 525 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 S100BP04271 92 aaPredicted RBP5.02□□□□□ -1.61
CCDC38-208ENST00000549876 PARP1P09874 1014 aaKnown RBP5.02□□□□□ -1.61
CCDC38-208ENST00000549876 PHKG2P15735 406 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 ACVR2AP27037 513 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 ME1P48163 572 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 CPT1AP50416 773 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 PGDP52209 483 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 DEUP1Q05D60 604 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 LARS2Q15031 903 aaKnown RBP5.02□□□□□ -1.61
CCDC38-208ENST00000549876 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
CCDC38-208ENST00000549876 TMTC4Q5T4D3 741 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 UBAP2Q5T6F2 1119 aaKnown RBP5.02□□□□□ -1.61
CCDC38-208ENST00000549876 ARFGAP1Q8N6T3 406 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
CCDC38-208ENST00000549876 ZFYVE19Q96K21 471 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 LRRC27Q9C0I9 530 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 HIPK2Q9H2X6 1198 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 SNX15Q9NRS6 342 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 RIMKLBQ9ULI2 386 aa5.02□□□□□ -1.61
CCDC38-208ENST00000549876 TSPAN6O43657 245 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 TMPRSS11DO60235 418 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 ZBED1O96006 694 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 CTSAP10619 480 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 MTHFSP49914 203 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 CFHR3Q02985 330 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 STK3Q13188 491 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms