RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 TMEM25Q86YD3 366 aa24.38■■□□□ 1.49
SMARCD1-204ENST00000547637 CCDC150Q8NCX0 1101 aa24.38■■□□□ 1.49
SMARCD1-204ENST00000547637 PLEKHO2Q8TD55 490 aa24.38■■□□□ 1.49
SMARCD1-204ENST00000547637 SMOQ99835 787 aa24.38■■□□□ 1.49
SMARCD1-204ENST00000547637 CSNK1G1Q9HCP0 422 aa24.38■■□□□ 1.49
SMARCD1-204ENST00000547637 CHD8Q9HCK8 2581 aa24.38■■□□□ 1.49
SMARCD1-204ENST00000547637 ANTXRLA6NF34 631 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 CDX4O14627 284 aaPredicted RBP24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 ADAM23O75077 832 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 ZNF217O75362 1048 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 VNN1O95497 513 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 NR3C1P04150 777 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 HOXB2P14652 356 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 MESP2Q0VG99 397 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 KMT5BQ4FZB7 885 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 SV2AQ7L0J3 742 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 ARMCX6Q7L4S7 300 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 SFTPA1Q8IWL2 248 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 GRAMD1CQ8IYS0 662 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 PHTF2Q8N3S3 785 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 PAGE5Q96GU1 130 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 BBS2Q9BXC9 721 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 DNAJC17Q9NVM6 304 aaKnown RBP24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 STARD13Q9Y3M8 1113 aa24.37■■□□□ 1.49
SMARCD1-204ENST00000547637 CCDC130P13994 396 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 PIK3CAP42336 1068 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 PI4KAP42356 2102 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 RPL6Q02878 288 aaKnown RBP24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 FOXC1Q12948 553 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 MAP7D1Q3KQU3 841 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 SLC23A3Q6PIS1 610 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 CHPFQ8IZ52 775 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 SDCBP2Q9H190 292 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 FAM49BQ9NUQ9 324 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 RCOR1Q9UKL0 485 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 SCML2Q9UQR0 700 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 PCDHA5Q9Y5H7 936 aa24.36■■□□□ 1.49
SMARCD1-204ENST00000547637 NEDD8-MDP1E9PL57 170 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 GIPC1O14908 333 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 KLRC4O43908 158 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 ASS1P00966 412 aaKnown RBP24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 PROS1P07225 676 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 ADORA2BP29275 332 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 RDXP35241 583 aaKnown RBP24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 PTGER3P43115 390 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 PLA2G4AP47712 749 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 PSEN1P49768 467 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 DUOXA1Q1HG43 343 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 HDDC3Q8N4P3 179 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 ZMIZ2Q8NF64 920 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 CYFIP2Q96F07 1278 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 HNRNPABQ99729 332 aaKnown RBP24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 NT5C1AQ9BXI3 368 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 KLF16Q9BXK1 252 aaPredicted RBP24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 KCTD10Q9H3F6 313 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 CYP3A43Q9HB55 503 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 PNPLA8Q9NP80 782 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 ZDHHC4Q9NPG8 344 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 CYLDQ9NQC7 956 aa24.35■■□□□ 1.49
SMARCD1-204ENST00000547637 KMT2BQ9UMN6 2715 aaPredicted RBP24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 MAPK13O15264 365 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 BEST1O76090 585 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 CFIP05156 583 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 KRT13P13646 458 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 TYRP14679 529 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 ACO1P21399 889 aaKnown RBP24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 VAMP7P51809 220 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 DLG4P78352 724 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 GFPT1Q06210 699 aaPredicted RBP24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 KLHDC10Q6PID8 442 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 TPGS1Q6ZTW0 290 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 C12orf29Q8N999 325 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 KIAA0895Q8NCT3 520 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 CDK5RAP1Q96SZ6 601 aaKnown RBP24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 MBD1Q9UIS9 605 aaPredicted RBP24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 DNMT3LQ9UJW3 386 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 PILRBQ9UKJ0 227 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 SLC6A14Q9UN76 642 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 ZNF510Q9Y2H8 683 aa24.34■■□□□ 1.49
SMARCD1-204ENST00000547637 CACNG3O60359 315 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 HLA-DRAP01903 254 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 RALAP11233 206 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 ENGP17813 658 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 RPL13P26373 211 aaKnown RBP24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 MAPK8P45983 427 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 ORC1Q13415 861 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 E2F5Q15329 346 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 INTS8Q75QN2 995 aaKnown RBP24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 MARK1Q9P0L2 795 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 TRAF3IP3Q9Y228 551 aa24.33■■□□□ 1.49
SMARCD1-204ENST00000547637 PLXND1Q9Y4D7 1925 aa24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 ACTN4O43707 911 aaKnown RBP24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 TBX18O95935 607 aa24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 CHRM1P11229 460 aaPredicted RBP24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 GABRG2P18507 467 aa24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 CMA1P23946 247 aa24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 ASPAP45381 313 aa24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 DGKGP49619 791 aa24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 DNM1Q05193 864 aaKnown RBP24.32■■□□□ 1.48
SMARCD1-204ENST00000547637 ZNF33AQ06730 810 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms