RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 EIF2DP41214 584 aaKnown RBP10.87□□□□□ -0.67
BEST3-208ENST00000547208 SLC6A11P48066 632 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 KIF11P52732 1056 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 CUL2Q13617 745 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 SIM2Q14190 667 aaPredicted RBP10.87□□□□□ -0.67
BEST3-208ENST00000547208 LY6G5CQ5SRR4 150 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 TCERG1LQ5VWI1 586 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 LAIR1Q6GTX8 287 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 FOXR2Q6PJQ5 311 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 CCDC186Q7Z3E2 898 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 ETFBKMTQ8IXQ9 262 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 TTC39CQ8N584 583 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 CAMKK1Q8N5S9 505 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 USP33Q8TEY7 942 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 EXOC4Q96A65 974 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 OTUB2Q96DC9 234 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 CEP63Q96MT8 703 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.87□□□□□ -0.67
BEST3-208ENST00000547208 TBC1D14Q9P2M4 693 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 ABCA7Q8IZY2 2146 aa10.87□□□□□ -0.67
BEST3-208ENST00000547208 USP24Q9UPU5 2620 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 DCDC2BA2VCK2 349 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 PMM2O15305 246 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 HOXC11O43248 304 aaPredicted RBP10.86□□□□□ -0.67
BEST3-208ENST00000547208 ADH1CP00326 375 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 ADH5P11766 374 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 TRIM21P19474 475 aaKnown RBP10.86□□□□□ -0.67
BEST3-208ENST00000547208 FMO5P49326 533 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 DMC1Q14565 340 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 RAB41Q5JT25 222 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 KLHDC10Q6PID8 442 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 PRR23BQ6ZRT6 265 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 HTR3DQ70Z44 454 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 TTC30AQ86WT1 665 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 TMEM25Q86YD3 366 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 ZNF276Q8N554 614 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 FAM160A2Q8N612 972 aaPredicted RBP10.86□□□□□ -0.67
BEST3-208ENST00000547208 LMO3Q8TAP4 145 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 GAB3Q8WWW8 586 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 NELFBQ8WX92 580 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 HEXIM2Q96MH2 286 aaKnown RBP10.86□□□□□ -0.67
BEST3-208ENST00000547208 HHIPQ96QV1 700 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 UBXN6Q9BZV1 441 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 METTL14Q9HCE5 456 aaKnown RBP10.86□□□□□ -0.67
BEST3-208ENST00000547208 NUDT5Q9UKK9 219 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 SLC8A2Q9UPR5 921 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 SH3BP1Q9Y3L3 701 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 SDK1Q7Z5N4 2213 aa10.86□□□□□ -0.67
BEST3-208ENST00000547208 TULP2O00295 520 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 BIN1O00499 593 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 MDM4O15151 490 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
BEST3-208ENST00000547208 KAT7O95251 611 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 RETP07949 1114 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 IRF1P10914 325 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 RARGP13631 454 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 HNRNPLP14866 589 aaKnown RBP eCLIP10.85□□□□□ -0.67
BEST3-208ENST00000547208 ATP5C1P36542 298 aaKnown RBP10.85□□□□□ -0.67
BEST3-208ENST00000547208 PPP1R2P41236 205 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 KIR2DL1P43626 348 aaPredicted RBP10.85□□□□□ -0.67
BEST3-208ENST00000547208 ATXN1P54253 815 aaKnown RBP10.85□□□□□ -0.67
BEST3-208ENST00000547208 SEC13P55735 322 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 STIM1Q13586 685 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 C2orf27AQ580R0 203 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 KLHL10Q6JEL2 608 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 Q6ZNB5 142 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 BHLHA9Q7RTU4 235 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 PIGZQ86VD9 579 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 GPR161Q8N6U8 529 aaKnown RBP10.85□□□□□ -0.67
BEST3-208ENST00000547208 ANKRD52Q8NB46 1076 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
BEST3-208ENST00000547208 ACDQ96AP0 544 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 P2RY11Q96G91 374 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 PNKPQ96T60 521 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 NACA2Q9H009 215 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 SPHK2Q9NRA0 654 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 EBF1Q9UH73 591 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 GMEB2Q9UKD1 530 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 HCN2Q9UL51 889 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 RAB23Q9ULC3 237 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 CTNND2Q9UQB3 1225 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 LAMA1P25391 3075 aa10.85□□□□□ -0.67
BEST3-208ENST00000547208 MUC22E2RYF6 1773 aaPredicted RBP10.85□□□□□ -0.67
BEST3-208ENST00000547208 CKAP5Q14008 2032 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 O00370 1275 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 LRP3O75074 770 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 TULP3O75386 442 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 RPP40O75818 363 aaKnown RBP10.84□□□□□ -0.67
BEST3-208ENST00000547208 STC2O76061 302 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 APBB3O95704 486 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 KLKB1P03952 638 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 MARSP56192 900 aaKnown RBP10.84□□□□□ -0.67
BEST3-208ENST00000547208 MRPS21P82921 87 aaKnown RBP10.84□□□□□ -0.67
BEST3-208ENST00000547208 GAD2Q05329 585 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 KDSRQ06136 332 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 SPEM2Q0P670 501 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 LRMPQ12912 555 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 PUM1Q14671 1186 aaKnown RBP eCLIP10.84□□□□□ -0.67
BEST3-208ENST00000547208 GOLGA7BQ2TAP0 167 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms