RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 ZNF396Q96N95 335 aaPredicted RBP20.62■□□□□ 0.89
C1RL-207ENST00000539927 TMEM121BQ9BXQ6 578 aaPredicted RBP20.62■□□□□ 0.89
C1RL-207ENST00000539927 SDCBP2Q9H190 292 aa20.62■□□□□ 0.89
C1RL-207ENST00000539927 DNAJC17Q9NVM6 304 aaKnown RBP20.62■□□□□ 0.89
C1RL-207ENST00000539927 NEDD8-MDP1E9PL57 170 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 POLR2DO15514 142 aaKnown RBP20.61■□□□□ 0.89
C1RL-207ENST00000539927 TLR5O60602 858 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 CUTAO60888 179 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 NTSR1P30989 418 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 AFMP43652 599 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 PGFP49763 221 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 SIM1P81133 766 aaPredicted RBP20.61■□□□□ 0.89
C1RL-207ENST00000539927 ZNF33AQ06730 810 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 NCOA4Q13772 614 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 FOXD4L5Q5VV16 416 aaPredicted RBP20.61■□□□□ 0.89
C1RL-207ENST00000539927 SNX30Q5VWJ9 437 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 EGFLAMQ63HQ2 1017 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 GRAMD4Q6IC98 578 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 CNNM4Q6P4Q7 775 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 SHC4Q6S5L8 630 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 SLC36A4Q6YBV0 504 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 TPGS1Q6ZTW0 290 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 FUKQ8N0W3 1084 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 FOXD4L4Q8WXT5 416 aaPredicted RBP20.61■□□□□ 0.89
C1RL-207ENST00000539927 GATA6Q92908 595 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 HCN2Q9UL51 889 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 SLC6A14Q9UN76 642 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 ADAMTS20P59510 1910 aa20.61■□□□□ 0.89
C1RL-207ENST00000539927 ACACAQ13085 2346 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 LRRIQ3A6PVS8 624 aaPredicted RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 ZBTB24O43167 697 aaPredicted RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 BEST1O76090 585 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 TBX18O95935 607 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 TUBP50607 506 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 MAP3K7CLP57077 242 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 GFPT1Q06210 699 aaPredicted RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 KNOP1Q1ED39 458 aaKnown RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 FOXD4L6Q3SYB3 417 aaPredicted RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 SDE2Q6IQ49 451 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 FOXD4L3Q6VB84 417 aaPredicted RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 CHPFQ8IZ52 775 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 ZMIZ2Q8NF64 920 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 OR2I1PQ8NGU4 316 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 CEP76Q8TAP6 659 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 KCNV2Q8TDN2 545 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 JAKMIP2Q96AA8 810 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 INTS4Q96HW7 963 aaKnown RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 ACOX2Q99424 681 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 SMOQ99835 787 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 BBS2Q9BXC9 721 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 FAM49BQ9NUQ9 324 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 IL37Q9NZH6 218 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 CGNQ9P2M7 1197 aaKnown RBP20.6■□□□□ 0.89
C1RL-207ENST00000539927 CYP8B1Q9UNU6 501 aa20.6■□□□□ 0.89
C1RL-207ENST00000539927 OPHN1O60890 802 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 VNN1O95497 513 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 ZDHHC11BP0C7U3 371 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 EHHADHQ08426 723 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 SEMA3BQ13214 749 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 CUL4BQ13620 913 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 PEAR1Q5VY43 1037 aaPredicted RBP20.59■□□□□ 0.89
C1RL-207ENST00000539927 C12orf56Q8IXR9 622 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 SLC2A14Q8TDB8 520 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 PARD3BQ8TEW8 1205 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 ZCCHC14Q8WYQ9 949 aaKnown RBP20.59■□□□□ 0.89
C1RL-207ENST00000539927 XPO6Q96QU8 1125 aaKnown RBP20.59■□□□□ 0.89
C1RL-207ENST00000539927 VRTNQ9H8Y1 702 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 TLR8Q9NR97 1041 aaKnown RBP20.59■□□□□ 0.89
C1RL-207ENST00000539927 COMMD8Q9NX08 183 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 HMGXB4Q9UGU5 601 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 KLK13Q9UKR3 277 aa20.59■□□□□ 0.89
C1RL-207ENST00000539927 IGHV1OR15-9A0A0B4J2B8 117 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 A0A1W2PQF6 199 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 TMEM8BA6NDV4 472 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 C4BPAP04003 597 aaKnown RBP20.58■□□□□ 0.89
C1RL-207ENST00000539927 SERPINF2P08697 491 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 TYRP14679 529 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 NDUFV2P19404 249 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 ADORA2BP29275 332 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 HOXD12P35452 270 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 NDST1P52848 882 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 BMT2Q1RMZ1 405 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 PIP4P1Q86T03 277 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 GRAMD1CQ8IYS0 662 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 MINDY1Q8N5J2 469 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 IPO4Q8TEX9 1081 aaKnown RBP20.58■□□□□ 0.89
C1RL-207ENST00000539927 BHMTQ93088 406 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 KLF16Q9BXK1 252 aaPredicted RBP20.58■□□□□ 0.89
C1RL-207ENST00000539927 SLC6A17Q9H1V8 727 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 FBXO44Q9H4M3 255 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 MAGEF1Q9HAY2 307 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.58■□□□□ 0.89
C1RL-207ENST00000539927 LSM7Q9UK45 103 aaKnown RBP20.58■□□□□ 0.89
C1RL-207ENST00000539927 RAD54BQ9Y620 910 aa20.58■□□□□ 0.89
C1RL-207ENST00000539927 FAM92AA1XBS5 289 aa20.57■□□□□ 0.88
C1RL-207ENST00000539927 SRRM3A6NNA2 597 aaPredicted RBP20.57■□□□□ 0.88
C1RL-207ENST00000539927 P4HA1P13674 534 aa20.57■□□□□ 0.88
C1RL-207ENST00000539927 ATP5C1P36542 298 aaKnown RBP20.57■□□□□ 0.88
C1RL-207ENST00000539927 AP3M2P53677 418 aa20.57■□□□□ 0.88
C1RL-207ENST00000539927 DLG4P78352 724 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms