RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 USP3Q9Y6I4 520 aa12.5□□□□□ -0.41
KNTC1-208ENST00000535410 WDR87Q6ZQQ6 2873 aa12.5□□□□□ -0.41
KNTC1-208ENST00000535410 PTPRDP23468 1912 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 TBC1D3BA6NDS4 549 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 BIN1O00499 593 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 AXIN1O15169 862 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 CYP26A1O43174 497 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 GADD45BO75293 160 aaPredicted RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 RPP40O75818 363 aaKnown RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 KAT7O95251 611 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 CD19P15391 556 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 OPRD1P41143 372 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 DGKEP52429 567 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 BST2Q10589 180 aaKnown RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 DMC1Q14565 340 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 ANO4Q32M45 955 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 LY6G5CQ5SRR4 150 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 ERMP1Q7Z2K6 904 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 TSTD1Q8NFU3 115 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 USP33Q8TEY7 942 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 ZFRQ96KR1 1074 aaKnown RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 IPO9Q96P70 1041 aaKnown RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 SRRTQ9BXP5 876 aaKnown RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 LRRC4Q9HBW1 653 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 OLA1Q9NTK5 396 aaKnown RBP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 EBF1Q9UH73 591 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 CTNND2Q9UQB3 1225 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.49□□□□□ -0.41
KNTC1-208ENST00000535410 GPR179Q6PRD1 2367 aa12.49□□□□□ -0.41
KNTC1-208ENST00000535410 PATJQ8NI35 1801 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 SPTBN4Q9H254 2564 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 A0A1W2PQH9 124 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 XPO1O14980 1071 aaKnown RBP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 ZBED1O96006 694 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 AFPP02771 609 aaKnown RBP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 SETSIPP0DME0 302 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 IRF1P10914 325 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 CHKAP35790 457 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 MARSP56192 900 aaKnown RBP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 LRMPQ12912 555 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 BYSLQ13895 437 aaKnown RBP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 PUM1Q14671 1186 aaKnown RBP eCLIP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 USP39Q53GS9 565 aaKnown RBP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 C2orf27AQ580R0 203 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 RAB41Q5JT25 222 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 EOGTQ5NDL2 527 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 SMYD5Q6GMV2 418 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 SDE2Q6IQ49 451 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 GPRIN1Q7Z2K8 1008 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 PIGZQ86VD9 579 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 BBS7Q8IWZ6 715 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 SIX6OS1Q8N1H7 587 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 PPM1KQ8N3J5 372 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 MLKLQ8NB16 471 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 GOLGA1Q92805 767 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 ARID3AQ99856 593 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 POLMQ9NP87 494 aaPredicted RBP12.48□□□□□ -0.41
KNTC1-208ENST00000535410 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 USP18Q9UMW8 372 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 PCDHB4Q9Y5E5 795 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 USP34Q70CQ2 3546 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 GREB1Q4ZG55 1949 aa12.48□□□□□ -0.41
KNTC1-208ENST00000535410 FANCMQ8IYD8 2048 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 OBSL1O75147 1896 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 K7EQS6 105 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 RHOBTB1O94844 696 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 TBX18O95935 607 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 CYBBP04839 570 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 BMP6P22004 513 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 TKTL1P51854 596 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 SEC13P55735 322 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 YWHAGP61981 247 aaKnown RBP eCLIP12.47□□□□□ -0.41
KNTC1-208ENST00000535410 GCNT1Q02742 428 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 DMWDQ09019 674 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 ELF2Q15723 593 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 CNGA2Q16280 664 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 TPD52L1Q16890 204 aaPredicted RBP12.47□□□□□ -0.41
KNTC1-208ENST00000535410 GOLGA7BQ2TAP0 167 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 PM20D1Q6GTS8 502 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 TMEM270Q6UE05 265 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 LCLAT1Q6UWP7 414 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 ENOSF1Q7L5Y1 443 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 MIB1Q86YT6 1006 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 TRIM59Q8IWR1 403 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 DCLK2Q8N568 766 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 EHBP1Q8NDI1 1231 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 RNF139Q8WU17 664 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 KCTD13Q8WZ19 329 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 BBS2Q9BXC9 721 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 TSPAN16Q9UKR8 245 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 ANAPC1Q9H1A4 1944 aa12.47□□□□□ -0.41
KNTC1-208ENST00000535410 VPS13AQ96RL7 3174 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms