RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LNPEPQ9UIQ6 1025 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 CPSF3Q9UKF6 684 aaKnown RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 TRUB2O95900 331 aaKnown RBP20.09■□□□□ 0.81
CAPN1-226ENST00000533820 ITGB3P05106 788 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 PGM1P36871 562 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 NETO2Q8NC67 525 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 SCG3Q8WXD2 468 aaKnown RBP20.09■□□□□ 0.81
CAPN1-226ENST00000533820 ANKRD36BP1Q96IX9 119 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 R3HDMLQ9H3Y0 253 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 TMEM134Q9H6X4 195 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 PPCSQ9HAB8 311 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 ZC3H7BQ9UGR2 993 aaKnown RBP20.09■□□□□ 0.81
CAPN1-226ENST00000533820 PCDHGC3Q9UN70 934 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 MICAL2O94851 1124 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 PDGFRAP16234 1089 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 BST1Q10588 318 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 MPP3Q13368 585 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 KRT81Q14533 505 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 DLK2Q6UY11 383 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 SLC25A41Q8N5S1 370 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 ALKBH8Q96BT7 664 aaKnown RBP20.09■□□□□ 0.81
CAPN1-226ENST00000533820 ELOVL4Q9GZR5 314 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 STOML1Q9UBI4 398 aa20.09■□□□□ 0.81
CAPN1-226ENST00000533820 FARP2O94887 1054 aaPredicted RBP20.08■□□□□ 0.81
CAPN1-226ENST00000533820 RBL1P28749 1068 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 NEK3P51956 506 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 ALDH18A1P54886 795 aaKnown RBP20.08■□□□□ 0.81
CAPN1-226ENST00000533820 IGBP1P78318 339 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 CHI3L2Q15782 390 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 CES4AQ5XG92 561 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 ZPBP2Q6X784 338 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 TREML1Q86YW5 311 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 SKA1Q96BD8 255 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 SSU72Q9NP77 194 aaKnown RBP20.08■□□□□ 0.81
CAPN1-226ENST00000533820 TEX264Q9Y6I9 313 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 FER1L6Q2WGJ9 1857 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 MYO18AQ92614 2054 aaKnown RBP20.08■□□□□ 0.81
CAPN1-226ENST00000533820 TRNP1Q6NT89 227 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 RXFP2Q8WXD0 754 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 RILPQ96NA2 401 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 MAGEB5Q9BZ81 275 aa20.08■□□□□ 0.81
CAPN1-226ENST00000533820 MTO1Q9Y2Z2 717 aaKnown RBP20.08■□□□□ 0.81
CAPN1-226ENST00000533820 SPDYE16A6NNV3 312 aaPredicted RBP20.08■□□□□ 0.8
CAPN1-226ENST00000533820 CLCN3P51790 818 aa20.08■□□□□ 0.8
CAPN1-226ENST00000533820 TRMT10BQ6PF06 316 aaKnown RBP20.08■□□□□ 0.8
CAPN1-226ENST00000533820 ZBTB8OSQ8IWT0 167 aa20.08■□□□□ 0.8
CAPN1-226ENST00000533820 SLC4A11Q8NBS3 891 aa20.08■□□□□ 0.8
CAPN1-226ENST00000533820 NIFKQ9BYG3 293 aaKnown RBP20.08■□□□□ 0.8
CAPN1-226ENST00000533820 MINDY3Q9H8M7 445 aa20.08■□□□□ 0.8
CAPN1-226ENST00000533820 SMYD2Q9NRG4 433 aa20.08■□□□□ 0.8
CAPN1-226ENST00000533820 SIX4Q9UIU6 781 aa20.08■□□□□ 0.8
CAPN1-226ENST00000533820 HMGCRP04035 888 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 KCNA3P22001 575 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 CDH5P33151 784 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-226ENST00000533820 YWHAZP63104 245 aaKnown RBP20.07■□□□□ 0.8
CAPN1-226ENST00000533820 PTPN11Q06124 597 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-226ENST00000533820 ATF7IP2Q5U623 682 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 TEX9Q8N6V9 391 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 C12orf29Q8N999 325 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 CMASQ8NFW8 434 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-226ENST00000533820 TLE6Q9H808 572 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 SLC17A6Q9P2U8 582 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 E2F8A0AVK6 867 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 I3L4J1 428 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 KLC1Q07866 573 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 TARBP2Q15633 366 aaKnown RBP20.07■□□□□ 0.8
CAPN1-226ENST00000533820 HSDL1Q3SXM5 330 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 UNC5BQ8IZJ1 945 aa20.07■□□□□ 0.8
CAPN1-226ENST00000533820 MED7O43513 233 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 PSMG1O95456 288 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 C1orf127Q8N9H9 656 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 SHKBP1Q8TBC3 707 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 ZNF398Q8TD17 642 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 ZNF333Q96JL9 665 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 PRPSAP2O60256 369 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 MAFO75444 373 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-226ENST00000533820 VHLP40337 213 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 GRIA1P42261 906 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-226ENST00000533820 AQP5P55064 265 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 SLC26A11Q86WA9 606 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 THTPAQ9BU02 230 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 SHCBP1LQ9BZQ2 653 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 C20orf27Q9GZN8 174 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 RSAD1Q9HA92 442 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 AS3MTQ9HBK9 375 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-226ENST00000533820 MEI4A8MW99 385 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 BAG2O95816 211 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 ZBED1O96006 694 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 DHRS4L1P0CG22 281 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 HMGB2P26583 209 aaKnown RBP20.06■□□□□ 0.8
CAPN1-226ENST00000533820 EFNA5P52803 228 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 AP3M2P53677 418 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 CRADDP78560 199 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 CA9Q16790 459 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 MPP5Q8N3R9 675 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 PHC3Q8NDX5 983 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 MMP19Q99542 508 aa20.06■□□□□ 0.8
CAPN1-226ENST00000533820 RNF19AQ9NV58 838 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms