RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PIGZQ86VD9 579 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 MIB1Q86YT6 1006 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 SFTPA1Q8IWL2 248 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 PPM1KQ8N3J5 372 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 KIAA1958Q8N8K9 716 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 FAXDC2Q96IV6 333 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 KLF16Q9BXK1 252 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-225ENST00000533704 PNPLA8Q9NP80 782 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 ZDHHC4Q9NPG8 344 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 CYLDQ9NQC7 956 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 CHMP5Q9NZZ3 219 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 RASAL2Q9UJF2 1139 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 COQ4Q9Y3A0 265 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 PCDHB4Q9Y5E5 795 aa10.99□□□□□ -0.65
CAPN1-225ENST00000533704 CEP192Q8TEP8 1941 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 K7EQS6 105 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 AXIN1O15169 862 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 RPP40O75818 363 aaKnown RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 KLF8O95600 359 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 APBB3O95704 486 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 TBXAS1P24557 533 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 TIE1P35590 1138 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 PSEN1P49768 467 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 DGKEP52429 567 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 UBE2HP62256 183 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 MESP2Q0VG99 397 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 CETN1Q12798 172 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 EFEMP1Q12805 493 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 ARHGAP17Q68EM7 881 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 TMEM270Q6UE05 265 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 TPGS1Q6ZTW0 290 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 RSRC2Q7L4I2 434 aaKnown RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 SYT13Q7L8C5 426 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 CCDC186Q7Z3E2 898 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 SCD5Q86SK9 330 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 TMEM25Q86YD3 366 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 FAM160A2Q8N612 972 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 ANKRD52Q8NB46 1076 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 TSTD1Q8NFU3 115 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 CCDC26Q8TAB7 109 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 UBA3Q8TBC4 463 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 USP33Q8TEY7 942 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 NDRG1Q92597 394 aaKnown RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 BHMTQ93088 406 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 RMDN1Q96DB5 314 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 OTUB2Q96DC9 234 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 SRRTQ9BXP5 876 aaKnown RBP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 SPHK2Q9NRA0 654 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.98□□□□□ -0.65
CAPN1-225ENST00000533704 HESX1Q9UBX0 185 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 DNMT3LQ9UJW3 386 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 TSPAN16Q9UKR8 245 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
CAPN1-225ENST00000533704 GON4LQ3T8J9 2241 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 TBC1D3BA6NDS4 549 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 NEDD8-MDP1E9PL57 170 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 TULP2O00295 520 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 TULP3O75386 442 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 CALCAP01258 141 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 RETP07949 1114 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 HOXA6P31267 233 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 GRIA2P42262 883 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 PLA2G4AP47712 749 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 TKTL1P51854 596 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 BCAT1P54687 386 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 PDE4CQ08493 712 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 ADIGQ0VDE8 80 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 RSPO4Q2I0M5 234 aaPredicted RBP10.97□□□□□ -0.65
CAPN1-225ENST00000533704 EMC10Q5UCC4 262 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 ANO7Q6IWH7 933 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 RRAGAQ7L523 313 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 TADA2BQ86TJ2 420 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 KBTBD6Q86V97 674 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 CAMKK1Q8N5S9 505 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 ALLCQ8N6M5 410 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 GPR161Q8N6U8 529 aaKnown RBP10.97□□□□□ -0.65
CAPN1-225ENST00000533704 TXNDC5Q8NBS9 432 aaKnown RBP10.97□□□□□ -0.65
CAPN1-225ENST00000533704 GAB3Q8WWW8 586 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 KAT5Q92993 513 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 BBS2Q9BXC9 721 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 ULBP1Q9BZM6 244 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 FAM124BQ9H5Z6 455 aaPredicted RBP10.97□□□□□ -0.65
CAPN1-225ENST00000533704 LRRC4Q9HBW1 653 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 PARD6AQ9NPB6 346 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 DNAJC17Q9NVM6 304 aaKnown RBP10.97□□□□□ -0.65
CAPN1-225ENST00000533704 DEC1Q9P2X7 70 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 INVSQ9Y283 1065 aa10.97□□□□□ -0.65
CAPN1-225ENST00000533704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.97□□□□□ -0.65
CAPN1-225ENST00000533704 PIK3R2O00459 728 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 XPO1O14980 1071 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 DCLK1O15075 740 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 TRIM24O15164 1050 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 HOXC11O43248 304 aaPredicted RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 STC2O76061 302 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 GNA14O95837 355 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 AFPP02771 609 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 VDRP11473 427 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 LCP1P13796 627 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms