RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SPOCD1Q6ZMY3 1216 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 BBS12Q6ZW61 710 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 PCGF5Q86SE9 256 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 DDX42Q86XP3 938 aaKnown RBP eCLIP5.84□□□□□ -1.47
PCF11-205ENST00000530906 CCDC50Q8IVM0 306 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 KIAA0319LQ8IZA0 1049 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SLC4A11Q8NBS3 891 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 BEST2Q8NFU1 509 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 OR13H1Q8NG92 308 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 CXorf38Q8TB03 319 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 TRAPPC12Q8WVT3 735 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SOCS4Q8WXH5 440 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 P3H4Q92791 437 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 COPS5Q92905 334 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 TLCD1Q96CP7 247 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 ZNF560Q96MR9 790 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SERPINB12Q96P63 405 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 MCEEQ96PE7 176 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SLITRK1Q96PX8 696 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 TBCBQ99426 244 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 FDXACB1Q9BRP7 624 aaPredicted RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 NT5C1AQ9BXI3 368 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 FRMD8Q9BZ67 464 aaPredicted RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 MUC3BQ9H195 1237 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 EPN3Q9H201 632 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 NEUROG2Q9H2A3 272 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SYNCQ9H7C4 482 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 MINDY3Q9H8M7 445 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 PCDH9Q9HC56 1237 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 ASNSD1Q9NWL6 643 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 UBQLN1Q9UMX0 589 aaKnown RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 NOVA2Q9UNW9 492 aaKnown RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.84□□□□□ -1.47
PCF11-205ENST00000530906 SHOC2Q9UQ13 582 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 ATP8A1Q9Y2Q0 1164 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SNX24Q9Y343 169 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 ACTL7BQ9Y614 415 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 TRPM7Q96QT4 1865 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 GRIN2DO15399 1336 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 hCG_1818297A0A087WSY0 165 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 CFAP69A5D8W1 941 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ERICH4A6NGS2 130 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 HAS3O00219 553 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 EBAG9O00559 213 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 RGS16O15492 202 aaPredicted RBP5.83□□□□□ -1.48
PCF11-205ENST00000530906 RIPK2O43353 540 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 LIASO43766 372 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 PRMT3O60678 531 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 WISP1O95388 367 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 MED26O95402 600 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 TTC4O95801 387 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 FAM107AO95990 144 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 KRT1P04264 644 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ITGB3P05106 788 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 KRT19P08727 400 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 IQCF3P0C7M6 154 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ZNF286BP0CG31 522 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 DARSP14868 501 aaKnown RBP5.83□□□□□ -1.48
PCF11-205ENST00000530906 KCNE1P15382 129 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 GLB1P16278 677 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 TSHRP16473 764 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 CD58P19256 250 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 CYP3A5P20815 502 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 PSMA2P25787 234 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 IVDP26440 423 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 SSTR4P31391 388 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 LSP1P33241 339 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ADCY8P40145 1251 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ADCYAP1R1P41586 468 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 CDKN2BP42772 138 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ZNF143P52747 638 aaPredicted RBP5.83□□□□□ -1.48
PCF11-205ENST00000530906 GYS2P54840 703 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 VCPP55072 806 aaKnown RBP5.83□□□□□ -1.48
PCF11-205ENST00000530906 HNRNPH2P55795 449 aaKnown RBP5.83□□□□□ -1.48
PCF11-205ENST00000530906 TAS2R40P59535 323 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 PSMC1P62191 440 aaKnown RBP5.83□□□□□ -1.48
PCF11-205ENST00000530906 IGBP1P78318 339 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 PDCLQ13371 301 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 TFDP2Q14188 446 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 STAT4Q14765 748 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 MORF4L2Q15014 288 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 PDK2Q15119 407 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 TRADDQ15628 312 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 PTGISQ16647 500 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 SEZ6Q53EL9 994 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 TNFAIP8L3Q5GJ75 292 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 FAM47CQ5HY64 1035 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 MARCH8Q5T0T0 291 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ARHGAP17Q68EM7 881 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 TAF2Q6P1X5 1199 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 C16orf46Q6P387 395 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 LRRC31Q6UY01 552 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 DLK2Q6UY11 383 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ADAMTSL4Q6UY14 1074 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 FAM43BQ6ZT52 329 aaPredicted RBP5.83□□□□□ -1.48
PCF11-205ENST00000530906 DPH6Q7L8W6 267 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 CATSPER4Q7RTX7 472 aa5.83□□□□□ -1.48
PCF11-205ENST00000530906 ADAT2Q7Z6V5 191 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms