RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PDZD7	Q9H5P4	517 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	PCDH18	Q9HCL0	1135 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	ETNK2	Q9NVF9	386 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	TSPAN16	Q9UKR8	245 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	ITGA11	Q9UKX5	1188 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	GSC2	O15499	205 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	CNMD	O75829	334 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	PFKM	P08237	780 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	NEFH	P12036	1026 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	KIRREL3	Q8IZU9	778 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	C7orf26	Q96N11	449 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	IQCG	Q9H095	443 aa	Known RBP	24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	MMADHC	Q9H3L0	296 aa	Predicted RBP	24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	ZC3H7B	Q9UGR2	993 aa	Known RBP	24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	PLLP	Q9Y342	182 aa		24.31	■■□□□ 1.48
GSDMD-208	ENST00000528475	IRF6	O14896	467 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	ZBED1	O96006	694 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	RBL1	P28749	1068 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	BCAR1	P56945	870 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	ZBTB16	Q05516	673 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	CDK18	Q07002	472 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	TMEM132D	Q14C87	1099 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	PPM1N	Q8N819	430 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	UPF1	Q92900	1129 aa	Known RBP eCLIP	24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	PIWIL1	Q96J94	861 aa	Known RBP	24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	PLAC1	Q9HBJ0	212 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	ENTPD5	O75356	428 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	PRKG1	Q13976	671 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	MTBP	Q96DY7	904 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	OXNAD1	Q96HP4	312 aa	Predicted RBP	24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	ZNF670	Q9BS34	389 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	NT5C1A	Q9BXI3	368 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	KCNK4	Q9NYG8	393 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	C2CD2	Q9Y426	696 aa		24.3	■■□□□ 1.48
GSDMD-208	ENST00000528475	MDM4	O15151	490 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	MAGEA3	P43357	314 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	RBP5	P82980	135 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	ZNF484	Q5JVG2	852 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	OLFML1	Q6UWY5	402 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	CDHR3	Q6ZTQ4	885 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	NT5DC4	Q86YG4	428 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	PCDH19	Q8TAB3	1148 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	FBXO6	Q9NRD1	293 aa	Predicted RBP	24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	GPRC5D	Q9NZD1	345 aa		24.29	■■□□□ 1.48
GSDMD-208	ENST00000528475	PAPPA2	Q9BXP8	1791 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	DNAJC25-GNG10	A0A024R161	153 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	SMNDC1	O75940	238 aa	Known RBP eCLIP	24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	APOE	P02649	317 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	SETSIP	P0DME0	302 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	MYL2	P10916	166 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	CDO1	Q16878	200 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	CTAGE3P	Q8IX95	158 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	RAB3IL1	Q8TBN0	382 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	SLC15A5	A6NIM6	579 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	CXorf49	A8MYA2	514 aa	Predicted RBP	24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	GYG2	O15488	501 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	RFPL1	O75677	317 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	ATP6V1C1	P21283	382 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	PTDSS1	P48651	473 aa	Known RBP	24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	PKDCC	Q504Y2	493 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	ATG16L1	Q676U5	607 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	RFWD3	Q6PCD5	774 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	CDKL3	Q8IVW4	592 aa	Predicted RBP	24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	LINC01465	Q8N7H1	131 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	ZBTB10	Q96DT7	871 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	SIRPG	Q9P1W8	387 aa		24.28	■■□□□ 1.48
GSDMD-208	ENST00000528475	TOMM70	O94826	608 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	SYCP2L	Q5T4T6	812 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	GADL1	Q6ZQY3	521 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	DPH6	Q7L8W6	267 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	SNRNP25	Q9BV90	132 aa	Known RBP	24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	SLC4A5	Q9BY07	1137 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	R3HDML	Q9H3Y0	253 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	DPP3	Q9NY33	737 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	ERAP1	Q9NZ08	941 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	STOML1	Q9UBI4	398 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475	HEY1	Q9Y5J3	304 aa		24.27	■■□□□ 1.48
GSDMD-208	ENST00000528475		I3L4J1	428 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	FCHO1	O14526	889 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	KRT38	O76015	456 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	PGK2	P07205	417 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	TPSB2	P20231	275 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	SDC4	P31431	198 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	ABL2	P42684	1182 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	MRPS5	P82675	430 aa	Known RBP	24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	TPSAB1	Q15661	275 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	GOLGA7B	Q2TAP0	167 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	FAM172A	Q8WUF8	416 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	KHSRP	Q92945	711 aa	Known RBP eCLIP	24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	PRR11	Q96HE9	360 aa	Predicted RBP	24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	SMYD2	Q9NRG4	433 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	TAS2R1	Q9NYW7	299 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	CORO1C	Q9ULV4	474 aa	Predicted RBP	24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475		A0A087WZ62	844 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	PIK3R2	O00459	728 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	GCAT	O75600	419 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	GRAP2	O75791	330 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	ESRRA	P11474	423 aa	Predicted RBP	24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	ACADS	P16219	412 aa		24.26	■■□□□ 1.47
GSDMD-208	ENST00000528475	DES	P17661	470 aa		24.26	■■□□□ 1.47

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms