RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ATP5C1P36542 298 aaKnown RBP10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 KIR2DL1P43626 348 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 STX17P56962 302 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 KDSRQ06136 332 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 RSPO4Q2I0M5 234 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 RAB41Q5JT25 222 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 BHLHA9Q7RTU4 235 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 CCDC186Q7Z3E2 898 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 KBTBD6Q86V97 674 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 CAMKK1Q8N5S9 505 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 NAT16Q8N8M0 369 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 ANKRD52Q8NB46 1076 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 GAB3Q8WWW8 586 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 TFAP2BQ92481 460 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 EXOC4Q96A65 974 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 OTUB2Q96DC9 234 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 MED15Q96RN5 788 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 PNKPQ96T60 521 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 ZSWIM1Q9BR11 485 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 NACA2Q9H009 215 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 ZDHHC4Q9NPG8 344 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 SPHK2Q9NRA0 654 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 DLL3Q9NYJ7 618 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 NAGPAQ9UK23 515 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 GMEB2Q9UKD1 530 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 CIZ1Q9ULV3 898 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 CTNND2Q9UQB3 1225 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 SGK1O00141 431 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 DCLK1O15075 740 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 AXIN1O15169 862 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 PMM2O15305 246 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 TULP3O75386 442 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 RPP40O75818 363 aaKnown RBP10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 GABBR2O75899 941 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 KLKB1P03952 638 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 TRIM21P19474 475 aaKnown RBP10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 EIF2DP41214 584 aaKnown RBP10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 GRIA2P42262 883 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 GAD2Q05329 585 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 PDE4CQ08493 712 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 STIM1Q13586 685 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 GOLGA7BQ2TAP0 167 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 CCDC40Q4G0X9 1142 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 C10orf120Q5SQS8 335 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 KLHDC10Q6PID8 442 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 Q6ZNB5 142 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 CEP68Q76N32 757 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 ABCA7Q8IZY2 2146 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 ZNF276Q8N554 614 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 TTC39CQ8N584 583 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 ALLCQ8N6M5 410 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 IL17RCQ8NAC3 791 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 UBA3Q8TBC4 463 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 SECISBP2LQ93073 1101 aaKnown RBP10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 ACDQ96AP0 544 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 FAM124BQ9H5Z6 455 aaPredicted RBP10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 METTL14Q9HCE5 456 aaKnown RBP10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 ARHGEF4Q9NR80 690 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 EBF1Q9UH73 591 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 RAB23Q9ULC3 237 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 MMP17Q9ULZ9 603 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 USP18Q9UMW8 372 aa10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.98□□□□□ -0.65
PRPF40B-204ENST00000527253 O00370 1275 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 ADAM23O75077 832 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 STC2O76061 302 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 KLF8O95600 359 aaPredicted RBP10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 APBB3O95704 486 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 APODP05090 189 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 VDRP11473 427 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 TIE1P35590 1138 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 PLA2G4AP47712 749 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 TKTL1P51854 596 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 MRPS21P82921 87 aaKnown RBP10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 CCDC6Q16204 474 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 CRY1Q16526 586 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 ANO4Q32M45 955 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 PLK5Q496M5 336 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 PKDCCQ504Y2 493 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 SGO2Q562F6 1265 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 PM20D1Q6GTS8 502 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 FOXR2Q6PJQ5 311 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 CACNA2D4Q7Z3S7 1137 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 RASSF3Q86WH2 238 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 MIB1Q86YT6 1006 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 ARHGEF19Q8IW93 802 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 GPR161Q8N6U8 529 aaKnown RBP10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 TXNDC5Q8NBS9 432 aaKnown RBP10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 SRRTQ9BXP5 876 aaKnown RBP10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 ULBP1Q9BZM6 244 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 SEMA4GQ9NTN9 838 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 CLIC5Q9NZA1 410 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 MARK1Q9P0L2 795 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 DNMT3LQ9UJW3 386 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 TSPAN16Q9UKR8 245 aa10.97□□□□□ -0.65
PRPF40B-204ENST00000527253 INVSQ9Y283 1065 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms