RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 KIFC3Q9BVG8 833 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 FAM126AQ9BYI3 521 aaPredicted RBP7.56□□□□□ -1.2
CASP4-205ENST00000525116 C2orf40Q9H1Z8 148 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 NOL6Q9H6R4 1146 aaKnown RBP7.56□□□□□ -1.2
CASP4-205ENST00000525116 ZNF334Q9HCZ1 680 aaPredicted RBP7.56□□□□□ -1.2
CASP4-205ENST00000525116 ARHGEF4Q9NR80 690 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 GFOD1Q9NXC2 390 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 ORC3Q9UBD5 711 aaPredicted RBP7.56□□□□□ -1.2
CASP4-205ENST00000525116 CGGBP1Q9UFW8 167 aaPredicted RBP7.56□□□□□ -1.2
CASP4-205ENST00000525116 EMC9Q9Y3B6 208 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 BACE2Q9Y5Z0 518 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 PIAS3Q9Y6X2 628 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 VWA8A3KMH1 1905 aa7.56□□□□□ -1.2
CASP4-205ENST00000525116 TRBV23-1A0A0A0MS06 115 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 SMIM28A0A1B0GU29 152 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 ARHGEF37A1IGU5 675 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 WDR27A2RRH5 827 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 ZNF197O14709 1029 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 GSC2O15499 205 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 SIGLEC6O43699 453 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 NEMFO60524 1076 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 MED24O75448 989 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 RETP07949 1114 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 TDGF1P13385 188 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CCNE1P24864 410 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CCR2P41597 374 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CXCL12P48061 93 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CCR3P51677 355 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 DCAF4L1Q3SXM0 396 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 PRSS36Q5K4E3 855 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CYP4A22Q5TCH4 519 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 NT5DC1Q5TFE4 455 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 RNF43Q68DV7 783 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 VITQ6UXI7 678 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CATSPER3Q86XQ3 398 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 NECAB1Q8N987 351 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 ZNF461Q8TAF7 563 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 WASF1Q92558 559 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 GATA6Q92908 595 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 SMARCD2Q92925 531 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 ZNF512Q96ME7 567 aaPredicted RBP7.55□□□□□ -1.2
CASP4-205ENST00000525116 UROC1Q96N76 676 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 PPP1R10Q96QC0 940 aaKnown RBP7.55□□□□□ -1.2
CASP4-205ENST00000525116 SEMA4GQ9NTN9 838 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 RBM12Q9NTZ6 932 aaKnown RBP7.55□□□□□ -1.2
CASP4-205ENST00000525116 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
CASP4-205ENST00000525116 TPCN1Q9ULQ1 816 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 PLAAQ9Y263 795 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 INSL5Q9Y5Q6 135 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CFAP47Q6ZTR5 3102 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 CHD6Q8TD26 2715 aa7.55□□□□□ -1.2
CASP4-205ENST00000525116 STK36Q9NRP7 1315 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 TPRP12270 2363 aaKnown RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 ARHGEF35A5YM69 484 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 BTBD18B2RXH4 712 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 TMEM189-UBE2V1I3L0A0 370 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 PODXLO00592 558 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 SLC30A4O14863 429 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ZNF263O14978 683 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 PFKFB2O60825 505 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ABLIM3O94929 683 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 KCNH1O95259 989 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 CTDNEP1O95476 244 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 CHRNB1P11230 501 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 FDPSP14324 419 aaKnown RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 PSMC3P17980 439 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 CYP11B2P19099 503 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 HOXC13P31276 330 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 MCM7P33993 719 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ADMP35318 185 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 NAMPTP43490 491 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 KPNA1P52294 538 aaPredicted RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 TWF1Q12792 350 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 TEAD2Q15562 447 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 CCDC6Q16204 474 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 CTXN3Q4LDR2 81 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ATF7IP2Q5U623 682 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 IQCEQ6IPM2 695 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 CEP68Q76N32 757 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ZNF765Q7L2R6 523 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 RTL10Q7L3V2 364 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 TRIM59Q8IWR1 403 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 SCUBE1Q8IWY4 988 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 YAF2Q8IY57 180 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 TCEAL8Q8IYN2 117 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ELMOD1Q8N336 334 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 ZNF513Q8N8E2 541 aaPredicted RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 ZSCAN18Q8TBC5 510 aaPredicted RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 ENOX1Q8TC92 643 aaKnown RBP7.54□□□□□ -1.2
CASP4-205ENST00000525116 CSGALNACT1Q8TDX6 532 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 IFT74Q96LB3 600 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 MTMR9Q96QG7 549 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 TM6SF1Q9BZW5 370 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 TMEM60Q9H2L4 133 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 SLITRK6Q9H5Y7 841 aa7.54□□□□□ -1.2
CASP4-205ENST00000525116 TUFT1Q9NNX1 390 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms