RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TULP2O00295 520 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 XPO1O14980 1071 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 AFPP02771 609 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 PAEPP09466 180 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 RALAP11233 206 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 CNR2P34972 360 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 EIF2DP41214 584 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 BCAT1P54687 386 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 SEC13P55735 322 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 GAD2Q05329 585 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 PDE4CQ08493 712 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 CETN1Q12798 172 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 SRSF5Q13243 272 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 C10orf120Q5SQS8 335 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 USP33Q8TEY7 942 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 ACDQ96AP0 544 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 PNKPQ96T60 521 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 CLIC5Q9NZA1 410 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 DNMT3LQ9UJW3 386 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 LSM7Q9UK45 103 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 KIAA1257Q9ULG3 409 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 MYO18AQ92614 2054 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 ANTXRLA6NF34 631 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 O00370 1275 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 HOXC11O43248 304 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 APODP05090 189 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 CCDC192P0DO97 292 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 TKTL1P51854 596 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 SLC8A3P57103 927 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 KDSRQ06136 332 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 GOLGA8FQ08AF8 430 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 GOLGA8DPQ0D2H9 430 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 BST2Q10589 180 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 SIM2Q14190 667 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 SYT13Q7L8C5 426 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 KIAA2013Q8IYS2 634 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 ARHGAP18Q8N392 663 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 PPM1KQ8N3J5 372 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 PHTF2Q8N3S3 785 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 CCDC26Q8TAB7 109 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 UBA3Q8TBC4 463 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 TFAP2BQ92481 460 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 HHIPQ96QV1 700 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 MED15Q96RN5 788 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 CDK5RAP1Q96SZ6 601 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 ULBP1Q9BZM6 244 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 INTS2Q9H0H0 1204 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 SPHK2Q9NRA0 654 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 HESX1Q9UBX0 185 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 RAB23Q9ULC3 237 aa11.74□□□□□ -0.53
TRAPPC4-204ENST00000524797 EP300Q09472 2414 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 RNF225M0QZC1 329 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 PXNP49023 591 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 YWHAGP61981 247 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 MESP2Q0VG99 397 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 DMC1Q14565 340 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 LPAL2Q16609 132 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 PKDCCQ504Y2 493 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 LAIR1Q6GTX8 287 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 TMEM270Q6UE05 265 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 RRAGAQ7L523 313 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 BHLHA9Q7RTU4 235 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 TMEM25Q86YD3 366 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 SFTPA1Q8IWL2 248 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 ETFBKMTQ8IXQ9 262 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 CAMKK1Q8N5S9 505 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 SECISBP2LQ93073 1101 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 KREMEN1Q96MU8 473 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 ARHGEF4Q9NR80 690 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 RASAL2Q9UJF2 1139 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 GPR179Q6PRD1 2367 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 ZNF292O60281 2723 aa11.73□□□□□ -0.53
TRAPPC4-204ENST00000524797 A0A0A0MRY4 1105 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 CCDC163A0A0D9SF12 145 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 KAT7O95251 611 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 CALCAP01258 141 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 ZNF132P52740 706 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 MRPS21P82921 87 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 GCNT1Q02742 428 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 EFEMP1Q12805 493 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 PM20D1Q6GTS8 502 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 Q6ZNB5 142 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 MLKLQ8NB16 471 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 GAB3Q8WWW8 586 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 NDRG1Q92597 394 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 CNOT6LQ96LI5 555 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 LRRC4Q9HBW1 653 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 GMEB2Q9UKD1 530 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 TULP3O75386 442 aa11.72□□□□□ -0.53
TRAPPC4-204ENST00000524797 STC2O76061 302 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms