RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ACOT1Q86TX2 421 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 HDDC3Q8N4P3 179 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 PLEKHO2Q8TD55 490 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 TMEM174Q8WUU8 243 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 XPO6Q96QU8 1125 aaKnown RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 TMEM121BQ9BXQ6 578 aaPredicted RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 CSNK1G1Q9HCP0 422 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 DNAJC17Q9NVM6 304 aaKnown RBP15.74■□□□□ 0.11
PRKDC-204ENST00000521331 FAM13BQ9NYF5 915 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 CALCOCO1Q9P1Z2 691 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 WDR35Q9P2L0 1181 aa15.74■□□□□ 0.11
PRKDC-204ENST00000521331 CACNG3O60359 315 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 VNN1O95497 513 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 RPN1P04843 607 aaKnown RBP15.73■□□□□ 0.11
PRKDC-204ENST00000521331 SERPINF2P08697 491 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 CCDC130P13994 396 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 CASP1P29466 404 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 SEMA3BQ13214 749 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 SGSM1Q2NKQ1 1148 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 PIP4P1Q86T03 277 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 UNC93AQ86WB7 457 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 SLC9A9Q8IVB4 645 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 CRYBG2Q8N1P7 616 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 ZMIZ2Q8NF64 920 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 SLC2A14Q8TDB8 520 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 TAF4BQ92750 862 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 GATA6Q92908 595 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 SMOQ99835 787 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 SDCBP2Q9H190 292 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 CYLDQ9NQC7 956 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.73■□□□□ 0.111e-8■■■■■ 26.8
PRKDC-204ENST00000521331 DMAC2Q9NW81 257 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 MARK1Q9P0L2 795 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 LSM7Q9UK45 103 aaKnown RBP15.73■□□□□ 0.11
PRKDC-204ENST00000521331 ASPMQ8IZT6 3477 aa15.73■□□□□ 0.11
PRKDC-204ENST00000521331 A0A1W2PQF6 199 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 NEDD8-MDP1E9PL57 170 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 GREM1O60565 184 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 OPHN1O60890 802 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 TOP3BO95985 862 aaKnown RBP15.72■□□□□ 0.11
PRKDC-204ENST00000521331 FAM200BP0CF97 657 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 PDIA4P13667 645 aaKnown RBP15.72■□□□□ 0.11
PRKDC-204ENST00000521331 ATP5C1P36542 298 aaKnown RBP15.72■□□□□ 0.11
PRKDC-204ENST00000521331 AFMP43652 599 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 NDST1P52848 882 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 MAP3K7CLP57077 242 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 ZNF33AQ06730 810 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 CUL4BQ13620 913 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 ZACNQ401N2 412 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 EGFLAMQ63HQ2 1017 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 MIB1Q86YT6 1006 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 CEP57L1Q8IYX8 460 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 CHPFQ8IZ52 775 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 WBP2Q969T9 261 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 GTPBP2Q9BX10 602 aaKnown RBP15.72■□□□□ 0.11
PRKDC-204ENST00000521331 BBS2Q9BXC9 721 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
PRKDC-204ENST00000521331 CAPN10Q9HC96 672 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 HCN2Q9UL51 889 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 SCML2Q9UQR0 700 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 NEUROG3Q9Y4Z2 214 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 GON4LQ3T8J9 2241 aa15.72■□□□□ 0.11
PRKDC-204ENST00000521331 ASCC3Q8N3C0 2202 aaKnown RBP15.71■□□□□ 0.11
PRKDC-204ENST00000521331 IGHV1OR15-9A0A0B4J2B8 117 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 H0Y626 953 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 TRIM24O15164 1050 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 BEST1O76090 585 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 TRIM16O95361 564 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 TBX18O95935 607 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 TYRP14679 529 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 RDXP35241 583 aaKnown RBP15.71■□□□□ 0.11
PRKDC-204ENST00000521331 WASP42768 502 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 SIM1P81133 766 aaPredicted RBP15.71■□□□□ 0.11
PRKDC-204ENST00000521331 HNRNPDQ14103 355 aaKnown RBP15.71■□□□□ 0.11
PRKDC-204ENST00000521331 RESP18Q5W5W9 173 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 KLHDC10Q6PID8 442 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 TMC2Q8TDI7 906 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.11
PRKDC-204ENST00000521331 GABRG3Q99928 467 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 CD248Q9HCU0 757 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 PNPLA8Q9NP80 782 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 FAM49BQ9NUQ9 324 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
PRKDC-204ENST00000521331 CACNA1EQ15878 2313 aa15.71■□□□□ 0.1
PRKDC-204ENST00000521331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.7■□□□□ 0.1
PRKDC-204ENST00000521331 A0A1W2PQD8 194 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 GFRA2O00451 464 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 ARHGAP33O14559 1287 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 IKBKBO14920 756 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 ASS1P00966 412 aaKnown RBP15.7■□□□□ 0.1
PRKDC-204ENST00000521331 SYPP08247 313 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 NDUFV2P19404 249 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 ME1P48163 572 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 PGFP49763 221 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 ORC1Q13415 861 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 KIAA1211LQ6NV74 962 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 TPGS1Q6ZTW0 290 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 DEFB119Q8N690 84 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 C12orf29Q8N999 325 aa15.7■□□□□ 0.1
PRKDC-204ENST00000521331 ELMO3Q96BJ8 720 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms