RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PLA2G4AP47712 749 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 KCNH2Q12809 1159 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 SIM2Q14190 667 aaPredicted RBP17.94■□□□□ 0.46
SQLE-205ENST00000521232 TADA2BQ86TJ2 420 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 KIAA2013Q8IYS2 634 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 EHBP1Q8NDI1 1231 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 USP33Q8TEY7 942 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 SECISBP2LQ93073 1101 aaKnown RBP17.94■□□□□ 0.46
SQLE-205ENST00000521232 SPHK2Q9NRA0 654 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 POLR3BQ9NW08 1133 aaPredicted RBP17.94■□□□□ 0.46
SQLE-205ENST00000521232 TSPAN16Q9UKR8 245 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 RAB23Q9ULC3 237 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 SDK1Q7Z5N4 2213 aa17.94■□□□□ 0.46
SQLE-205ENST00000521232 SPAG17Q6Q759 2223 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 XPO1O14980 1071 aaKnown RBP17.93■□□□□ 0.46
SQLE-205ENST00000521232 HOXC11O43248 304 aaPredicted RBP17.93■□□□□ 0.46
SQLE-205ENST00000521232 FGFR1OPO95684 399 aaKnown RBP17.93■□□□□ 0.46
SQLE-205ENST00000521232 RALAP11233 206 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 PDE4CQ08493 712 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 GOLGA8FQ08AF8 430 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 GOLGA8DPQ0D2H9 430 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 MESP2Q0VG99 397 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 SRSF5Q13243 272 aaKnown RBP17.93■□□□□ 0.46
SQLE-205ENST00000521232 GOLGA7BQ2TAP0 167 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 C10orf120Q5SQS8 335 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 PM20D1Q6GTS8 502 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 LAIR1Q6GTX8 287 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 C12orf40Q86WS4 652 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 TMEM25Q86YD3 366 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
SQLE-205ENST00000521232 ARHGAP18Q8N392 663 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 GPR161Q8N6U8 529 aaKnown RBP17.93■□□□□ 0.46
SQLE-205ENST00000521232 ACDQ96AP0 544 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 CDK5RAP1Q96SZ6 601 aaKnown RBP17.93■□□□□ 0.46
SQLE-205ENST00000521232 RWDD2AQ9UIY3 292 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 NUDT5Q9UKK9 219 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 DNAH14Q0VDD8 3507 aa17.93■□□□□ 0.46
SQLE-205ENST00000521232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.92■□□□□ 0.46
SQLE-205ENST00000521232 RNF225M0QZC1 329 aaPredicted RBP17.92■□□□□ 0.46
SQLE-205ENST00000521232 TULP2O00295 520 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 O00370 1275 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 MDM4O15151 490 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 KAT7O95251 611 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 AFPP02771 609 aaKnown RBP17.92■□□□□ 0.46
SQLE-205ENST00000521232 APODP05090 189 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 PAEPP09466 180 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 CCDC192P0DO97 292 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 CD19P15391 556 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 GRIA2P42262 883 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 TNFRSF4P43489 277 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 PXNP49023 591 aaPredicted RBP17.92■□□□□ 0.46
SQLE-205ENST00000521232 TKTL1P51854 596 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 BCAT1P54687 386 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 MRPS21P82921 87 aaKnown RBP17.92■□□□□ 0.46
SQLE-205ENST00000521232 GCNT1Q02742 428 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 BST2Q10589 180 aaKnown RBP17.92■□□□□ 0.46
SQLE-205ENST00000521232 DMC1Q14565 340 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 PKDCCQ504Y2 493 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 TMEM270Q6UE05 265 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 LCLAT1Q6UWP7 414 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 PRR23BQ6ZRT6 265 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 ETFBKMTQ8IXQ9 262 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 PPM1KQ8N3J5 372 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 PHTF2Q8N3S3 785 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 HESX1Q9UBX0 185 aa17.92■□□□□ 0.46
SQLE-205ENST00000521232 LSM7Q9UK45 103 aaKnown RBP17.92■□□□□ 0.46
SQLE-205ENST00000521232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.92■□□□□ 0.463e-9■□□□□ 9.5
SQLE-205ENST00000521232 EML5Q05BV3 1969 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 ANTXRLA6NF34 631 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 ZBED1O96006 694 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 RETP07949 1114 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 TGM1P22735 817 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 CNGA2Q16280 664 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 LPAL2Q16609 132 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 C2orf27AQ580R0 203 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 BTBD8Q5XKL5 378 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 Q6ZNB5 142 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 UBA3Q8TBC4 463 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 KCTD13Q8WZ19 329 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 TFAP2BQ92481 460 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 KAT5Q92993 513 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 MED15Q96RN5 788 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 ARHGEF4Q9NR80 690 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 EBF1Q9UH73 591 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 GMEB2Q9UKD1 530 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 PCDHB4Q9Y5E5 795 aa17.91■□□□□ 0.46
SQLE-205ENST00000521232 TULP3O75386 442 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 STC2O76061 302 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 SETSIPP0DME0 302 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 CHRM1P11229 460 aaPredicted RBP17.9■□□□□ 0.46
SQLE-205ENST00000521232 KIR2DL1P43626 348 aaPredicted RBP17.9■□□□□ 0.46
SQLE-205ENST00000521232 SEC13P55735 322 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 YWHAGP61981 247 aaKnown RBP eCLIP17.9■□□□□ 0.46
SQLE-205ENST00000521232 COG7P83436 770 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 ANO4Q32M45 955 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 PREPLQ4J6C6 727 aaPredicted RBP17.9■□□□□ 0.46
SQLE-205ENST00000521232 CLEC17AQ6ZS10 378 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 RRAGAQ7L523 313 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 BHLHA9Q7RTU4 235 aa17.9■□□□□ 0.46
SQLE-205ENST00000521232 ARHGEF19Q8IW93 802 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms