RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 NSMCE4AQ9NXX6 385 aa3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 FAM53CQ9NYF3 392 aa3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CNOT6Q9ULM6 557 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CLCA2Q9UQC9 943 aa3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RCE1Q9Y256 329 aa3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SSX2IPQ9Y2D8 614 aa3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SLC27A6Q9Y2P4 619 aa3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SH3BP1Q9Y3L3 701 aa3.64□□□□□ -1.83
SCARNA15.2-201ENST00000516409 A0A1B0GTW7 788 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 AGAP5A6NIR3 686 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 F5H697 171 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 H3BNC9 293 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 KIAA0355O15063 1070 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ZNF185O15231 689 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MFAP3LO75121 409 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PTP4A3O75365 173 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 IPO13O94829 963 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TMEM63AO94886 807 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ZFPL1O95159 310 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LARGE1O95461 756 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SLC3A2P08195 630 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 AKR1B1P15121 316 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GLDCP23378 1020 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CD6P30203 668 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 APOBEC3AP31941 199 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 THBS4P35443 961 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ACTN2P35609 894 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PSMC2P35998 433 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GSTM5P46439 218 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ANXA11P50995 505 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PDE6CP51160 858 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TERF1P54274 439 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ARF3P61204 181 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ARF1P84077 181 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TIAL1Q01085 375 aaKnown RBP eCLIP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CAP1Q01518 475 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NFIXQ14938 502 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBCEQ15813 527 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 BAK1Q16611 211 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NFIL3Q16649 462 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CD300EQ496F6 205 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 FAM69AQ5T7M9 428 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SNX30Q5VWJ9 437 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ANKRD40Q6AI12 368 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SLC9A4Q6AI14 798 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TMCO3Q6UWJ1 677 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LRRC8DQ7L1W4 858 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CPLX4Q7Z7G2 160 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ARMC8Q8IUR7 673 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ABRAQ8N0Z2 381 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SYNE4Q8N205 404 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LRRC71Q8N4P6 559 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NGEFQ8N5V2 710 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GPATCH11Q8N954 259 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 USP38Q8NB14 1042 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TP53I13Q8NBR0 393 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ATRIPQ8WXE1 791 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TMEM125Q96AQ2 219 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 REXO5Q96IC2 774 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LMF1Q96S06 567 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 C17orf80Q9BSJ5 609 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PHF7Q9BWX1 381 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ARHGAP39Q9C0H5 1083 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TTYH1Q9H313 450 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NKIRAS2Q9NYR9 191 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 VPS28Q9UK41 221 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NFU1Q9UMS0 254 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NAALADL1Q9UQQ1 740 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ZBTB1Q9Y2K1 713 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 COL15A1P39059 1388 aa3.63□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LOC105369274A0A096LPK9 316 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LOC102723532A0A0G2JNH3 316 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 B4DLN1 442 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 E7ENX8 843 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CTIFO43310 598 aaKnown RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RECQL4O94761 1208 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 URI1O94763 535 aaPredicted RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 WDR47O94967 919 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GPANK1O95872 356 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 F9P00740 461 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ERBB2P04626 1255 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PDHA1P08559 390 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MYCLP12524 364 aaPredicted RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 JUNBP17275 347 aaPredicted RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ALOX12P18054 663 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TGM1P22735 817 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 EPHA3P29320 983 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MSX2P35548 267 aaPredicted RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RGS2P41220 211 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PAFAH1B1P43034 410 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 HARS2P49590 506 aaKnown RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MTHFSP49914 203 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CDK7P50613 346 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 IRAK1P51617 712 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 AFF3P51826 1226 aaKnown RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RNASE9P60153 205 aaKnown RBP3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TAP2Q03519 686 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 OCA2Q04671 838 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 BFSP2Q13515 415 aa3.62□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SPECC1Q5M775 1068 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms