RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 LMBRD2Q68DH5 695 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 RNF43Q68DV7 783 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 NAIF1Q69YI7 327 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 VSTM1Q6UX27 236 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 STXBP4Q6ZWJ1 553 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 OSTM1Q86WC4 334 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 CCDC65Q8IXS2 484 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 ARL14EPQ8N8R7 260 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 RHBDD1Q8TEB9 315 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 SH3RF2Q8TEC5 729 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 HPDLQ96IR7 371 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 FAM84AQ96KN4 292 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 CLIC6Q96NY7 704 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 SLC22A12Q96S37 553 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 PKMYT1Q99640 499 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 SYT15Q9BQS2 421 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 VRTNQ9H8Y1 702 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 RXFP3Q9NSD7 469 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 EHD2Q9NZN4 543 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 MAGEC2Q9UBF1 373 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
CDC42SE2-212ENST00000515533 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 C2orf78A6NCI8 922 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 ZNF233A6NK53 670 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 GABRDO14764 452 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 HCRTO43612 131 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 PRPF6O94906 941 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 PSMC1P62191 440 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 CYP27A1Q02318 531 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 DOC2BQ14184 412 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 CCDC142Q17RM4 750 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 TCEAL6Q6IPX3 200 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 FAM171BQ6P995 826 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 DENND5BQ6ZUT9 1274 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 C11orf74Q86VG3 221 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 TSTD1Q8NFU3 115 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 CXorf38Q8TB03 319 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 TCEAL3Q969E4 200 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 MYLPFQ96A32 169 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 MMS19Q96T76 1030 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 EDEM2Q9BV94 578 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 PANK2Q9BZ23 570 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 DUSP15Q9H1R2 295 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 SMOC1Q9H4F8 434 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 INTS13Q9NVM9 706 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 POLR3BQ9NW08 1133 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 TRPM5Q9NZQ8 1165 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 EBF1Q9UH73 591 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 SIX4Q9UIU6 781 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 CDH9Q9ULB4 789 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 ARHGAP26Q9UNA1 814 aa9.49□□□□□ -0.89
CDC42SE2-212ENST00000515533 CACNA1EQ15878 2313 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 DCLK1O15075 740 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 ATP2C2O75185 946 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 CAVIN2O95810 425 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 ABL1P00519 1130 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 PDGFRBP09619 1106 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 TCF3P15923 654 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 PFKLP17858 780 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 BDNFP23560 247 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 PPP3CCP48454 512 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 SEC13P55735 322 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 C2orf27AQ580R0 203 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 N4BP2L1Q5TBK1 243 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 SCARA3Q6AZY7 606 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 FAM173BQ6P4H8 233 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 CHSY3Q70JA7 882 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 HS2ST1Q7LGA3 356 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 WDR49Q8IV35 697 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 PDILTQ8N807 584 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 OR5B17Q8NGF7 314 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 KBTBD7Q8WVZ9 684 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 SPATA17Q96L03 361 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 CEP295NLQ96MC4 621 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 FNBP1Q96RU3 617 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 LSM14BQ9BX40 385 aaKnown RBP9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 FGFBP2Q9BYJ0 223 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 TPSD1Q9BZJ3 242 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 LRRC27Q9C0I9 530 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 KIAA1586Q9HCI6 787 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 DNAAF2Q9NVR5 837 aaKnown RBP9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 GCNT4Q9P109 453 aa9.48□□□□□ -0.89
CDC42SE2-212ENST00000515533 IGF2RP11717 2491 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 BCLAF3A2AJT9 711 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 LEFTY2O00292 366 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 SLC9A3R1O14745 358 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 TM4SF5O14894 197 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 CLSTN1O94985 981 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 KCNK5O95279 499 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 DLATP10515 647 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 TNNI1P19237 187 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 SYT1P21579 422 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 WARSP23381 471 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 LMO2P25791 158 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 PMLP29590 882 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 TNNC1P63316 161 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms