RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 M0QYV0 167 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 SLC9A3R1O14745 358 aaPredicted RBP17.33■□□□□ 0.36
DDX41-213ENST00000512027 GABBR2O75899 941 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 PAEPP09466 180 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 KRT5P13647 590 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 ZNF132P52740 706 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 SEC13P55735 322 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 SLC8A3P57103 927 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 AMPD2Q01433 879 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 KDSRQ06136 332 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 EFEMP1Q12805 493 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 PKDCCQ504Y2 493 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 HEATR6Q6AI08 1181 aaKnown RBP17.33■□□□□ 0.36
DDX41-213ENST00000512027 TRIM65Q6PJ69 517 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 ZC3H14Q6PJT7 736 aaKnown RBP17.33■□□□□ 0.36
DDX41-213ENST00000512027 LCLAT1Q6UWP7 414 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 NELL1Q92832 810 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 SECISBP2LQ93073 1101 aaKnown RBP17.33■□□□□ 0.36
DDX41-213ENST00000512027 UBXN6Q9BZV1 441 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 ACP6Q9NPH0 428 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 ZSCAN32Q9NX65 697 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 AJAP1Q9UKB5 411 aaPredicted RBP17.33■□□□□ 0.36
DDX41-213ENST00000512027 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.33■□□□□ 0.36
DDX41-213ENST00000512027 EML5Q05BV3 1969 aa17.33■□□□□ 0.36
DDX41-213ENST00000512027 FAM186AA6NE01 2351 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 CHURC1-FNTBB4DL54 471 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 ZBED1O96006 694 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 HMBSP08397 361 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 ADH5P11766 374 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 LCP1P13796 627 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 DRD1P21728 446 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 PLA2G4AP47712 749 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 PXNP49023 591 aaPredicted RBP17.32■□□□□ 0.36
DDX41-213ENST00000512027 FNTBP49356 437 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 YWHAGP61981 247 aaKnown RBP eCLIP17.32■□□□□ 0.36
DDX41-213ENST00000512027 ARHGAP44Q17R89 818 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 PMF1Q6P1K2 205 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 MAMSTRQ6ZN01 415 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 SYNPOQ8N3V7 929 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 NAT16Q8N8M0 369 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 ZBTB44Q8NCP5 570 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 RPLP0P6Q8NHW5 317 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 THAP9Q9H5L6 903 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 LRRC4Q9HBW1 653 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 SAMSN1Q9NSI8 373 aaKnown RBP17.32■□□□□ 0.36
DDX41-213ENST00000512027 TBC1D14Q9P2M4 693 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 DNMT3LQ9UJW3 386 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 GVINP1Q7Z2Y8 2422 aa17.32■□□□□ 0.36
DDX41-213ENST00000512027 GPR179Q6PRD1 2367 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 ADH1CP00326 375 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 LMNAP02545 664 aaKnown RBP17.31■□□□□ 0.36
DDX41-213ENST00000512027 SETSIPP0DME0 302 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 RALAP11233 206 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 ERCC5P28715 1186 aaPredicted RBP17.31■□□□□ 0.36
DDX41-213ENST00000512027 PSEN1P49768 467 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 SRSF5Q13243 272 aaKnown RBP17.31■□□□□ 0.36
DDX41-213ENST00000512027 PM20D1Q6GTS8 502 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 GBP6Q6ZN66 633 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 TMEM25Q86YD3 366 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 KIAA1958Q8N8K9 716 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 CLEC4CQ8WTT0 213 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 ATRIPQ8WXE1 791 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 ZDHHC4Q9NPG8 344 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 SPHK2Q9NRA0 654 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 CLIC5Q9NZA1 410 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 KIAA1257Q9ULG3 409 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 PCDHGA2Q9Y5H1 932 aa17.31■□□□□ 0.36
DDX41-213ENST00000512027 EP300Q09472 2414 aaPredicted RBP17.31■□□□□ 0.36
DDX41-213ENST00000512027 OTOGLQ3ZCN5 2332 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 YJEFN3A6XGL0 299 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 BECN2A8MW95 431 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 E7ENQ6 273 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 K7EQS6 105 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 TRIM24O15164 1050 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 LILRB5O75023 590 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 STC2O76061 302 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
DDX41-213ENST00000512027 PON1P27169 355 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 CNGA2Q16280 664 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 MAN2A1Q16706 1144 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 EXOC3L4Q17RC7 722 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 ANO4Q32M45 955 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 MIIPQ5JXC2 388 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 DENND1BQ6P3S1 775 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 TPGS1Q6ZTW0 290 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 HTR3DQ70Z44 454 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 RSRC2Q7L4I2 434 aaKnown RBP17.3■□□□□ 0.36
DDX41-213ENST00000512027 SIX6OS1Q8N1H7 587 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 SUMF1Q8NBK3 374 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 EDEM1Q92611 657 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 P2RY11Q96G91 374 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 SIX2Q9NPC8 291 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 DACH1Q9UI36 760 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 CNTN6Q9UQ52 1028 aa17.3■□□□□ 0.36
DDX41-213ENST00000512027 LETM1O95202 739 aaPredicted RBP17.29■□□□□ 0.36
DDX41-213ENST00000512027 PAPSS2O95340 614 aaPredicted RBP17.29■□□□□ 0.36
DDX41-213ENST00000512027 KLKB1P03952 638 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 PNMA6AP0CW24 399 aaPredicted RBP17.29■□□□□ 0.36
DDX41-213ENST00000512027 USP8P40818 1118 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 DAOAP59103 153 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms