RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 GRM2Q14416 872 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 ZNF77Q15935 545 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 PTPN20Q4JDL3 420 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 ARHGAP29Q52LW3 1261 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 NAA35Q5VZE5 725 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 PPP1R2P3Q6NXS1 205 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 CC2D1AQ6P1N0 951 aaPredicted RBP13.48□□□□□ -0.25
COL6A6-203ENST00000511332 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 ZDHHC17Q8IUH5 632 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 SCUBE3Q8IX30 993 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 WDTC1Q8N5D0 677 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 KIAA1958Q8N8K9 716 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 ST13P5Q8NFI4 369 aaPredicted RBP13.48□□□□□ -0.25
COL6A6-203ENST00000511332 SH3RF2Q8TEC5 729 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 CLEC4CQ8WTT0 213 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 RNF139Q8WU17 664 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 RSPRY1Q96DX4 576 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 AGPAT1Q99943 283 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 RNF38Q9H0F5 515 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 SLC2A4RGQ9NR83 387 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 DNMT3LQ9UJW3 386 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 STRIP2Q9ULQ0 834 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 CCL26Q9Y258 94 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 BZW2Q9Y6E2 419 aaKnown RBP13.48□□□□□ -0.25
COL6A6-203ENST00000511332 MIA3Q5JRA6 1907 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 TTC28Q96AY4 2481 aa13.48□□□□□ -0.25
COL6A6-203ENST00000511332 LEFTY2O00292 366 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 ZNF263O14978 683 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 CHADO15335 359 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 PAPSS1O43252 624 aaPredicted RBP13.47□□□□□ -0.25
COL6A6-203ENST00000511332 GABBR2O75899 941 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 ERBB2P04626 1255 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 CYP1A1P04798 512 aaPredicted RBP13.47□□□□□ -0.25
COL6A6-203ENST00000511332 CHRNB2P17787 502 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 CASP14P31944 242 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 NSFP46459 744 aaKnown RBP13.47□□□□□ -0.25
COL6A6-203ENST00000511332 PGFP49763 221 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 ZXDAP98168 799 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 CENPCQ03188 943 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 KLHL30Q0D2K2 578 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 MTF1Q14872 753 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
COL6A6-203ENST00000511332 BSPRYQ5W0U4 402 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 VPS36Q86VN1 386 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 ERICH1Q86X53 443 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 CPLX3Q8WVH0 158 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 NDRG1Q92597 394 aaKnown RBP13.47□□□□□ -0.25
COL6A6-203ENST00000511332 IRF7Q92985 503 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 FAM149B1Q96BN6 582 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 RPP25Q9BUL9 199 aaKnown RBP13.47□□□□□ -0.25
COL6A6-203ENST00000511332 PLA2G2FQ9BZM2 168 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 ASNSD1Q9NWL6 643 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 SMPD4Q9NXE4 827 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 KIAA1549LQ6ZVL6 1849 aa13.47□□□□□ -0.25
COL6A6-203ENST00000511332 NARSO43776 548 aaKnown RBP13.46□□□□□ -0.25
COL6A6-203ENST00000511332 HSF2BPO75031 334 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 GLI1P08151 1106 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 GDI1P31150 447 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 SCNN1AP37088 669 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 GABRB2P47870 512 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 SIGLEC14Q08ET2 396 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 EFEMP1Q12805 493 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 EFHC1Q5JVL4 640 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.25
COL6A6-203ENST00000511332 OR6B2Q6IFH4 312 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 MSANTD2Q6P1R3 559 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 OLFML1Q6UWY5 402 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 FAM183BPQ6ZVS7 135 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 BEND5Q7L4P6 421 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 TMC6Q7Z403 805 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 CNGA4Q8IV77 575 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 TTC16Q8NEE8 873 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 CPA5Q8WXQ8 436 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 EDEM1Q92611 657 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 EDAQ92838 391 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 C18orf8Q96DM3 657 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 ZFRQ96KR1 1074 aaKnown RBP13.46□□□□□ -0.25
COL6A6-203ENST00000511332 HAUS4Q9H6D7 363 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 POPDC2Q9HBU9 364 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 TRPV5Q9NQA5 729 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 MARCH2Q9P0N8 246 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 CFAP97Q9P2B7 532 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 TJP2Q9UDY2 1190 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 RASAL2Q9UJF2 1139 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 LSM7Q9UK45 103 aaKnown RBP13.46□□□□□ -0.25
COL6A6-203ENST00000511332 FBXL21Q9UKT6 434 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
COL6A6-203ENST00000511332 E2F8A0AVK6 867 aa13.45□□□□□ -0.26
COL6A6-203ENST00000511332 PI4K2BG5E9Z4 385 aa13.45□□□□□ -0.26
COL6A6-203ENST00000511332 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
COL6A6-203ENST00000511332 CAPN9O14815 690 aa13.45□□□□□ -0.26
COL6A6-203ENST00000511332 AP5Z1O43299 807 aa13.45□□□□□ -0.26
COL6A6-203ENST00000511332 MFAP3LO75121 409 aa13.45□□□□□ -0.26
COL6A6-203ENST00000511332 SERPING1P05155 500 aa13.45□□□□□ -0.26
COL6A6-203ENST00000511332 CALB1P05937 261 aa13.45□□□□□ -0.26
COL6A6-203ENST00000511332 UNGP13051 313 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms