RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 CLEC17AQ6ZS10 378 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 PIGZQ86VD9 579 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 TTC30AQ86WT1 665 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 ETFBKMTQ8IXQ9 262 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 PHTF2Q8N3S3 785 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 GPR161Q8N6U8 529 aaKnown RBP12.78□□□□□ -0.36
CLDND1-223ENST00000511081 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 USP33Q8TEY7 942 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 MED15Q96RN5 788 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 PNKPQ96T60 521 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
CLDND1-223ENST00000511081 EBF1Q9UH73 591 aa12.78□□□□□ -0.36
CLDND1-223ENST00000511081 MYO18AQ92614 2054 aaKnown RBP12.77□□□□□ -0.36
CLDND1-223ENST00000511081 A0A1W2PQH9 124 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.37
CLDND1-223ENST00000511081 ADH1CP00326 375 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 PAEPP09466 180 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 VDRP11473 427 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 RARGP13631 454 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 TNFRSF4P43489 277 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
CLDND1-223ENST00000511081 GAD2Q05329 585 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 PAK1Q13153 545 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 CCDC40Q4G0X9 1142 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 LAIR1Q6GTX8 287 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 BHLHA9Q7RTU4 235 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 TMEM25Q86YD3 366 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 SCML4Q8N228 414 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 RPLP0P6Q8NHW5 317 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 KCTD13Q8WZ19 329 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 SPHK2Q9NRA0 654 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 POLR3BQ9NW08 1133 aaPredicted RBP12.77□□□□□ -0.37
CLDND1-223ENST00000511081 DNMT3LQ9UJW3 386 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 CNTN6Q9UQ52 1028 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
CLDND1-223ENST00000511081 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 SDK1Q7Z5N4 2213 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 ANTXRLA6NF34 631 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 TULP2O00295 520 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 O00370 1275 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 SCAMP3O14828 347 aaKnown RBP12.76□□□□□ -0.37
CLDND1-223ENST00000511081 XPO1O14980 1071 aaKnown RBP12.76□□□□□ -0.37
CLDND1-223ENST00000511081 RETP07949 1114 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 ADH5P11766 374 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 GRIA2P42262 883 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 KIR2DL1P43626 348 aaPredicted RBP12.76□□□□□ -0.37
CLDND1-223ENST00000511081 STX17P56962 302 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 GCNT1Q02742 428 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 PDE4CQ08493 712 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 SIM2Q14190 667 aaPredicted RBP12.76□□□□□ -0.37
CLDND1-223ENST00000511081 DMC1Q14565 340 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 CNGA2Q16280 664 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 HSF5Q4G112 596 aaPredicted RBP12.76□□□□□ -0.37
CLDND1-223ENST00000511081 SMYD5Q6GMV2 418 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 Q6ZNB5 142 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 C12orf40Q86WS4 652 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 IRF2BP1Q8IU81 584 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 SLC35F5Q8WV83 523 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 GAB3Q8WWW8 586 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 JAKMIP2Q96AA8 810 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 NT5C1BQ96P26 610 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 CDK5RAP1Q96SZ6 601 aaKnown RBP12.76□□□□□ -0.37
CLDND1-223ENST00000511081 MARK1Q9P0L2 795 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 FBXO10Q9UK96 956 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 TSPAN16Q9UKR8 245 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 CTNND2Q9UQB3 1225 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 EML5Q05BV3 1969 aa12.76□□□□□ -0.37
CLDND1-223ENST00000511081 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-223ENST00000511081 LRP3O75074 770 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 STC2O76061 302 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 KAT7O95251 611 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
CLDND1-223ENST00000511081 KLKB1P03952 638 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 RALAP11233 206 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 ZNF132P52740 706 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 BCAT1P54687 386 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 SLC8A3P57103 927 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 COG7P83436 770 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 BST2Q10589 180 aaKnown RBP12.75□□□□□ -0.37
CLDND1-223ENST00000511081 CETN1Q12798 172 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 LRMPQ12912 555 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 SRSF5Q13243 272 aaKnown RBP12.75□□□□□ -0.37
CLDND1-223ENST00000511081 HEATR6Q6AI08 1181 aaKnown RBP12.75□□□□□ -0.37
CLDND1-223ENST00000511081 TADA2BQ86TJ2 420 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 KIAA2013Q8IYS2 634 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 ARHGAP18Q8N392 663 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 MLKLQ8NB16 471 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 TFAP2BQ92481 460 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 ACDQ96AP0 544 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 ZC3H10Q96K80 434 aaKnown RBP12.75□□□□□ -0.37
CLDND1-223ENST00000511081 ZSWIM1Q9BR11 485 aa12.75□□□□□ -0.37
CLDND1-223ENST00000511081 NACA2Q9H009 215 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms