RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 MATR3P43243 847 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNF8-207ENST00000509995 USP46P62068 366 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 STRN3Q13033 797 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 AAMPQ13685 434 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 CCDC142Q17RM4 750 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 INTS6LQ5JSJ4 861 aaKnown RBP11.52□□□□□ -0.57
SNF8-207ENST00000509995 ZPBP2Q6X784 338 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 CACUL1Q86Y37 369 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 TMEM25Q86YD3 366 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 TMPRSS6Q8IU80 811 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 FBXL16Q8N461 479 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 FAM26EQ8N5C1 309 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 PRCCQ92733 491 aaPredicted RBP11.52□□□□□ -0.57
SNF8-207ENST00000509995 FUBP3Q96I24 572 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNF8-207ENST00000509995 MMS19Q96T76 1030 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 STON1Q9Y6Q2 735 aa11.52□□□□□ -0.57
SNF8-207ENST00000509995 SLC16A4O15374 487 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 FAM189A1O60320 539 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 CACNG3O60359 315 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 MBL2P11226 248 aaPredicted RBP11.51□□□□□ -0.57
SNF8-207ENST00000509995 ACADMP11310 421 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 CKMT2P17540 419 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 LSSP48449 732 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 ZNF132P52740 706 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 C21orf59P57076 290 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 MYL7Q01449 175 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 SHBQ15464 509 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 PRAMEF14Q5SWL7 426 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 FAM124AQ86V42 546 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 SPATA2LQ8IUW3 424 aaPredicted RBP11.51□□□□□ -0.57
SNF8-207ENST00000509995 BBS7Q8IWZ6 715 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 ACBD6Q9BR61 282 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 POLR1BQ9H9Y6 1135 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 GTF3C4Q9UKN8 822 aa11.51□□□□□ -0.57
SNF8-207ENST00000509995 CPLX1O14810 134 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 YKT6O15498 198 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 HIP1RO75146 1068 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 POU3F2P20265 443 aaPredicted RBP11.5□□□□□ -0.57
SNF8-207ENST00000509995 ACAT1P24752 427 aaKnown RBP11.5□□□□□ -0.57
SNF8-207ENST00000509995 CD27P26842 260 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 EPHA8P29322 1005 aaPredicted RBP11.5□□□□□ -0.57
SNF8-207ENST00000509995 MAGEA11P43364 429 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 PPP3CCP48454 512 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 COPAP53621 1224 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 SKOR1P84550 965 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 GRIN1Q05586 938 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 ST3GAL1Q11201 340 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 TMEM132DQ14C87 1099 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 KYAT1Q16773 422 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 ARL13BQ3SXY8 428 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 BIRC7Q96CA5 298 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 FAM212AQ96EL1 285 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 SPATA17Q96L03 361 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
SNF8-207ENST00000509995 DUSP9Q99956 384 aaKnown RBP11.5□□□□□ -0.57
SNF8-207ENST00000509995 SEMA3CQ99985 751 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 ORAI3Q9BRQ5 295 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 ARHGAP9Q9BRR9 750 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 TTLL2Q9BWV7 592 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 ACE2Q9BYF1 805 aaPredicted RBP11.5□□□□□ -0.57
SNF8-207ENST00000509995 LRRC4CQ9HCJ2 640 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 CRYBG3Q68DQ2 2970 aa11.5□□□□□ -0.57
SNF8-207ENST00000509995 KPNA7A9QM74 516 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 NEDD8-MDP1E9PL57 170 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 WNT7AO00755 349 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 VILLO15195 856 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 TSPAN3O60637 253 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 USP12O75317 370 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 ABL1P00519 1130 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 FAM87AP0C7U9 286 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 SFTPCP11686 197 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 MUTP22033 750 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 ACP1P24666 158 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 ACSL1P33121 698 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 AFMP43652 599 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 EVCP57679 992 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 E2F1Q01094 437 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 MAPK7Q13164 816 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 NR5A1Q13285 461 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 SV2CQ496J9 727 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 SFMBT2Q5VUG0 894 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 CD302Q8IX05 232 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 PDCL2Q8N4E4 241 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 ERMNQ8TAM6 284 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 EXTL1Q92935 676 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 CCDC97Q96F63 343 aaPredicted RBP11.49□□□□□ -0.57
SNF8-207ENST00000509995 CEP295NLQ96MC4 621 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 C17orf75Q9HAS0 396 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 GJB4Q9NTQ9 266 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 DDX43Q9NXZ2 648 aaKnown RBP11.49□□□□□ -0.57
SNF8-207ENST00000509995 LRWD1Q9UFC0 647 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 DERAQ9Y315 318 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 SH3BP1Q9Y3L3 701 aa11.49□□□□□ -0.57
SNF8-207ENST00000509995 CELSR2Q9HCU4 2923 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 OGTO15294 1046 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 SYNCRIPO60506 623 aaKnown RBP11.48□□□□□ -0.57
SNF8-207ENST00000509995 SEMA4FO95754 770 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 ITGB2P05107 769 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 TYRP14679 529 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms