RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 GPR161Q8N6U8 529 aaKnown RBP18.89■□□□□ 0.61
TPM3-220ENST00000509601 HHIPQ96QV1 700 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 NACA2Q9H009 215 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 SPHK2Q9NRA0 654 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 GMEB2Q9UKD1 530 aa18.89■□□□□ 0.61
TPM3-220ENST00000509601 MYO18AQ92614 2054 aaKnown RBP18.89■□□□□ 0.61
TPM3-220ENST00000509601 TULP2O00295 520 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 KAT7O95251 611 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 PLA2G4AP47712 749 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 SEC13P55735 322 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 STX17P56962 302 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 FAM160A2Q8N612 972 aaPredicted RBP18.88■□□□□ 0.61
TPM3-220ENST00000509601 NAT16Q8N8M0 369 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 CCDC26Q8TAB7 109 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 GAB3Q8WWW8 586 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 CLIC5Q9NZA1 410 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 EBF1Q9UH73 591 aa18.88■□□□□ 0.61
TPM3-220ENST00000509601 AXIN1O15169 862 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 HOXC11O43248 304 aaPredicted RBP18.87■□□□□ 0.61
TPM3-220ENST00000509601 HNRNPLP14866 589 aaKnown RBP eCLIP18.87■□□□□ 0.61
TPM3-220ENST00000509601 GRIA2P42262 883 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 KIR2DL1P43626 348 aaPredicted RBP18.87■□□□□ 0.61
TPM3-220ENST00000509601 PSEN1P49768 467 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 MRPS21P82921 87 aaKnown RBP18.87■□□□□ 0.61
TPM3-220ENST00000509601 SPEM2Q0P670 501 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 CCDC40Q4G0X9 1142 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 CEP68Q76N32 757 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 CCDC33Q8N5R6 958 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 ACDQ96AP0 544 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 ARHGEF4Q9NR80 690 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 DLL3Q9NYJ7 618 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 DNMT3LQ9UJW3 386 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 NAGPAQ9UK23 515 aa18.87■□□□□ 0.61
TPM3-220ENST00000509601 EML5Q05BV3 1969 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 KIAA1549LQ6ZVL6 1849 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 BICDL2A1A5D9 508 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 RNF225M0QZC1 329 aaPredicted RBP18.86■□□□□ 0.61
TPM3-220ENST00000509601 TRIM24O15164 1050 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 TULP3O75386 442 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 RPP40O75818 363 aaKnown RBP18.86■□□□□ 0.61
TPM3-220ENST00000509601 APODP05090 189 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 TNFRSF4P43489 277 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 PDE4CQ08493 712 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 RSPO4Q2I0M5 234 aaPredicted RBP18.86■□□□□ 0.61
TPM3-220ENST00000509601 C10orf120Q5SQS8 335 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 PM20D1Q6GTS8 502 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 Q6ZNB5 142 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 KBTBD6Q86V97 674 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 EHBP1Q8NDI1 1231 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 NDRG1Q92597 394 aaKnown RBP18.86■□□□□ 0.61
TPM3-220ENST00000509601 SRRTQ9BXP5 876 aaKnown RBP18.86■□□□□ 0.61
TPM3-220ENST00000509601 TSPAN16Q9UKR8 245 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 HCN2Q9UL51 889 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 MMP17Q9ULZ9 603 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 CTNND2Q9UQB3 1225 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 SPAG17Q6Q759 2223 aa18.86■□□□□ 0.61
TPM3-220ENST00000509601 P4HA2O15460 535 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 APBB3O95704 486 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 KLKB1P03952 638 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 RALAP11233 206 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 VDRP11473 427 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 TBXAS1P24557 533 aaPredicted RBP18.85■□□□□ 0.61
TPM3-220ENST00000509601 MARSP56192 900 aaKnown RBP18.85■□□□□ 0.61
TPM3-220ENST00000509601 CRY1Q16526 586 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 GOLGA7BQ2TAP0 167 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 ANO4Q32M45 955 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 PKDCCQ504Y2 493 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 SGO2Q562F6 1265 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 TMEM92Q6UXU6 159 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 BHLHA9Q7RTU4 235 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 CACNA2D4Q7Z3S7 1137 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 IL17RCQ8NAC3 791 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 UBA3Q8TBC4 463 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 TFAP2BQ92481 460 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 KAT5Q92993 513 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 P2RY11Q96G91 374 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 MED15Q96RN5 788 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 ZSWIM1Q9BR11 485 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 KIAA1468Q9P260 1216 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 KIAA1257Q9ULG3 409 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 USP18Q9UMW8 372 aa18.85■□□□□ 0.61
TPM3-220ENST00000509601 CACNA1AO00555 2505 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.84■□□□□ 0.61
TPM3-220ENST00000509601 O00370 1275 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 XPO1O14980 1071 aaKnown RBP18.84■□□□□ 0.61
TPM3-220ENST00000509601 DCLK1O15075 740 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 LRP3O75074 770 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 STC2O76061 302 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 CD19P15391 556 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 TIE1P35590 1138 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 TKTL1P51854 596 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 UBE2HP62256 183 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 YWHAEP62258 255 aaKnown RBP18.84■□□□□ 0.61
TPM3-220ENST00000509601 KDSRQ06136 332 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 KCNH2Q12809 1159 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 PAK1Q13153 545 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 CAMK4Q16566 473 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 BTBD8Q5XKL5 378 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms